RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 NGFP01138 241 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 CBR1P16152 277 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 CCL11P51671 97 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 RTL8AQ9BWD3 113 aa12.92□□□□□ -0.34
UBE2D4-201ENST00000222402 F8VVB4 439 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 F8VWA3 439 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 RPL36A-HNRNPH2H7BZ11 118 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 IAPPP10997 89 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 TMEM187Q14656 261 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 SIGLEC12Q96PQ1 595 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 TTTY12Q9BZ98 90 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 PLEKHF2Q9H8W4 249 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 IGKV1-12A0A0C4DH73 117 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 RRP8O43159 456 aaKnown RBP12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 IGKV1D-12P01611 117 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 LTC4SQ16873 150 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 OR2B11Q5JQS5 317 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 TMEM251Q8N6I4 163 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 TMEM178AQ8NBL3 297 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 MOB3AQ96BX8 217 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 PLK3Q9H4B4 646 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 ESRP2Q9H6T0 727 aaKnown RBP12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 OTX1P32242 354 aaPredicted RBP12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 NOVA1P51513 510 aaKnown RBP12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 HGFACQ04756 655 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 LFNGQ8NES3 379 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 FAM117AQ9C073 453 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 PROK2Q9HC23 129 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 PARP11Q9NR21 331 aa12.91□□□□□ -0.34
UBE2D4-201ENST00000222402 PINLYPA6NC86 204 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 CDRT15L2A8MXV6 281 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 GPR37O15354 613 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 DAOP14920 347 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 P2RY1P47900 373 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 FHITP49789 147 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 RAB5CP51148 216 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 UBE2KP61086 200 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 RSPO1Q2MKA7 263 aaPredicted RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 TMPRSS7Q7RTY8 843 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 GGNQ86UU5 652 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 CPEB3Q8NE35 698 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 MARS2Q96GW9 593 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 RIMS4Q9H426 269 aaPredicted RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 CYTL1Q9NRR1 136 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 UFSP2Q9NUQ7 469 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 TRGV5A0A0B4J1U4 118 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 PMS2P1A4D2B8 440 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 SYNGR1O43759 233 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 GAPDHP04406 335 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 RPS10P46783 165 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 EWSR1Q01844 656 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 KIAA2026Q5HYC2 2103 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 TRBV6-7A0A0A0MS04 114 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 MEX3AA1L020 520 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 ZNF724A8MTY0 619 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 CTRB1P17538 263 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
UBE2D4-201ENST00000222402 TLE4Q04727 773 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 OR8B8Q15620 311 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 SLC23A3Q6PIS1 610 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 RNF138Q8WVD3 245 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 ISOC2Q96AB3 205 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 SPTA1P02549 2419 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 FREM1Q5H8C1 2179 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 FGF16O43320 207 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 OR2B8PP59922 312 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 CXorf67Q86X51 503 aaPredicted RBP12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 TP53RKQ96S44 253 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 RNF150Q9ULK6 438 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 URGCP-MRPS24S4R325 110 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 TRDCB7Z8K6 153 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 CLDN1O95832 211 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 ZXDAP98168 799 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 Q0VFX4 171 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 WASF3Q9UPY6 502 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 POLDIP2Q9Y2S7 368 aa12.89□□□□□ -0.35
UBE2D4-201ENST00000222402 ZFP92A6NM28 416 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 GCH1P30793 250 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 FGF12P61328 243 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 OR8G1Q15617 311 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 CEACAM21Q3KPI0 293 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 OR8G2PQ6IF36 304 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF808Q8N4W9 903 aaPredicted RBP12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 NTNG2Q96CW9 530 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 GNPNAT1Q96EK6 184 aaPredicted RBP12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 POMT1Q9Y6A1 747 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 CDS2O95674 445 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 SEC11BP0C7V7 166 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 GABRA2P47869 451 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 CXorf66Q5JRM2 361 aaPredicted RBP12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 SPANXN5Q5MJ07 72 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 UBAC2Q8NBM4 344 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms