RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF266Q14584 549 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 SP5Q6BEB4 398 aaPredicted RBP11.97□□□□□ -0.49
SIX4-201ENST00000216513 OR8D4Q8NGM9 314 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 ZNF596Q8TC21 504 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 CA10Q9NS85 328 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 OOEPA6NGQ2 149 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 C17orf51A8MQB3 221 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 IL5P05113 134 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 C9orf106Q8NAJ2 232 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 ZNF236Q9UL36 1845 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 NCOR1O75376 2440 aa11.97□□□□□ -0.49
SIX4-201ENST00000216513 E9PLN8 166 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 TO15178 435 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 CTRB1P17538 263 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 LPAR6P43657 344 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 HOXA4Q00056 320 aaPredicted RBP11.96□□□□□ -0.49
SIX4-201ENST00000216513 CTRB2Q6GPI1 263 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 FAHD1Q6P587 224 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 TERB2Q8NHR7 220 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 P2RX4Q99571 388 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 VKORC1Q9BQB6 163 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 GON7Q9BXV9 100 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 ZNF275Q9NSD4 429 aaPredicted RBP11.96□□□□□ -0.49
SIX4-201ENST00000216513 LPAR3Q9UBY5 353 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 OR5H1A6NKK0 313 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 ICMTO60725 284 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 RNF224P0DH78 156 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 EPXP11678 715 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 TFPI2P48307 235 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 DEGS2Q6QHC5 323 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 C1orf174Q8IYL3 243 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
SIX4-201ENST00000216513 PSENENQ9NZ42 101 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 CD40P25942 277 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 ADGRL4Q9HBW9 690 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 NAGKQ9UJ70 344 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
SIX4-201ENST00000216513 LOXL3P58215 753 aa11.96□□□□□ -0.5
SIX4-201ENST00000216513 TMEM147Q9BVK8 224 aa11.96□□□□□ -0.5
SIX4-201ENST00000216513 A0A1W2PN81 502 aa11.96□□□□□ -0.5
SIX4-201ENST00000216513 CHRNA7P36544 502 aa11.96□□□□□ -0.5
SIX4-201ENST00000216513 PSME4Q14997 1843 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 RECKO95980 971 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 NGFRP08138 427 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 FCER1GP30273 86 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 FGF8P55075 233 aaPredicted RBP11.95□□□□□ -0.5
SIX4-201ENST00000216513 ZNF764Q96H86 408 aaPredicted RBP11.95□□□□□ -0.5
SIX4-201ENST00000216513 ACSM4P0C7M7 580 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 LHX4Q969G2 390 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 ADGRG7Q96K78 797 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 SLC25A22Q9H936 323 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 PCM1Q15154 2024 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 H3F3CQ6NXT2 135 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 RNF165Q6ZSG1 346 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 SLC16A12Q6ZSM3 486 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 Q6ZT83 130 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 CKAP5Q14008 2032 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 PDCD6O75340 191 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 S100A4P26447 101 aaKnown RBP11.95□□□□□ -0.5
SIX4-201ENST00000216513 OR5I1Q13606 314 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
SIX4-201ENST00000216513 HIST2H3AQ71DI3 136 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 GPX8Q8TED1 209 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 PPP1R1CQ8WVI7 109 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 GHITMQ9H3K2 345 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 ERVH48-1M5A8F1 160 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 TIMM23BQ5SRD1 257 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 ZPLD1Q8TCW7 415 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 SCPEP1Q9HB40 452 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 SLC52A3Q9NQ40 469 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 PATJQ8NI35 1801 aa11.95□□□□□ -0.5
SIX4-201ENST00000216513 COL4A6Q14031 1691 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 UNQ9370/PRO34162Q6UXP9 181 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 APH1BQ8WW43 257 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 PITPNC1Q9UKF7 332 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 JUNBP17275 347 aaPredicted RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 EVX1P49640 407 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 PAFAH1B2P68402 229 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 TCF15Q12870 199 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 RTN4IP1Q8WWV3 396 aaPredicted RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 SOX7Q9BT81 388 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 CHCHD2Q9Y6H1 151 aaPredicted RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 ZNF646O15015 1829 aaPredicted RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 VSIG10L2P0DP72 767 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 CTF1Q16619 201 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 APCDD1LQ8NCL9 501 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 OR5A2Q8NGI9 324 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 RP1P56715 2156 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 GEMIN2O14893 280 aaKnown RBP11.94□□□□□ -0.5
SIX4-201ENST00000216513 ST8SIA3O43173 380 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 ZFPL1O95159 310 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 H2AFB1P0C5Y9 115 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 FGF7P21781 194 aa11.94□□□□□ -0.5
SIX4-201ENST00000216513 LYZP61626 148 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms