RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Hnf1aP22361 628 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 NrgnP60761 78 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Q80Y39 304 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Vangl1Q80Z96 526 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Akr1c18Q8K023 323 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Tor2aQ8R1J9 321 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr713Q920G5 324 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 PsenenQ9CQR7 101 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Foxj2Q9ES18 565 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Htr6Q9R1C8 440 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 BC035044E0CXF8 138 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr68E9PYY2 315 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr623E9Q382 317 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm3099J3QPA5 205 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Hoxb4P10284 250 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Hist1h1cP15864 212 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Apobec4Q497M3 374 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 SrmQ64674 302 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Spred3Q6P6N5 408 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 H2-M2Q6W9L1 343 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Zfp874bQ7M6X2 447 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Plcxd3Q8BLJ3 321 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Wipf1Q8K1I7 493 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Neil1Q8K4Q6 389 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mib2Q8R516 973 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr1309Q8VF83 320 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mid1ip1Q9CQ20 182 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Tssk4Q9D411 328 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Hoga1Q9DCU9 321 aa18.24■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Esp16A8R0U9 85 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm21560D3Z7A4 205 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cdhr4H3BJZ2 783 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 MstnO08689 376 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Ifi203O35368 408 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Pla2g2aP31482 146 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Apoc1P34928 88 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Ag2Q3UPL5 249 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr314Q7TRZ7 330 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Or51e2Q8VBV9 320 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cd209cQ91ZW9 178 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Zcchc12Q9CZA5 402 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Derl3Q9D8K3 228 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Slco1a4Q9EP96 670 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Yipf5Q9EQQ2 257 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Anxa10Q9QZ10 324 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Rgs11Q9Z2H1 443 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Igkv4-80A0A075B5L7 116 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Wdr1O88342 606 aaKnown RBP18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cbr1P48758 277 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Vgll3P85442 326 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 UngP97931 306 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Defb33Q30KN3 62 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Tob1Q61471 362 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Msl2Q69ZF8 577 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Oxgr1Q6IYF8 337 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm10277Q6R5C6 214 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Slc22a20Q80UJ1 556 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 FarsaQ8C0C7 508 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Ing4Q8C0D7 249 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Tmem5Q8VDX6 444 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cacng5Q8VHW4 275 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 BlvrbQ923D2 206 aaKnown RBP18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr944Q9EQ91 311 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Wdr31Q9JHB4 367 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Syngr4Q9Z1L2 233 aa18.23■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr1214A2ATG3 311 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr1328B1ARV2 313 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Wdr86D3Z757 380 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 GusbP12265 648 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cfhr1Q61406 343 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mgat4aQ812G0 535 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Klhl42Q8BFQ9 493 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Stk17bQ8BG48 372 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mfsd9Q8C0T7 466 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Nedd4lQ8CFI0 1004 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 SdhaQ8K2B3 664 aaKnown RBP18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Nsun5Q8K4F6 465 aaKnown RBP18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Vmn1r228Q8R2A7 333 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Tmem144Q8VEH0 348 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cox4i2Q91W29 172 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Itfg2Q91WI7 443 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Ufsp2Q99K23 461 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 1700025F22RikQ9D9Y7 111 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Ssmem1Q9D9Y8 244 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Polg2Q9QZM2 459 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 PlpbpQ9Z2Y8 274 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm26992S4R1A3 76 aa18.22■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Zfp69A2A761 587 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Agr2O88312 175 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cacng2O88602 323 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 P01804 111 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Il1bP10749 269 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Hmga2P52927 108 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Rab2bP59279 216 aaKnown RBP18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Tmem211Q3UUA0 195 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm21093Q6GQS8 569 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 4930451G09RikQ8C5G4 195 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 C1ql2Q8CFR0 287 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr976Q8VF15 326 aa18.21■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cst6Q9D1B1 149 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms