RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Tmem242Q8VCR3 140 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr483Q8VG05 315 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Fgfrl1Q91V87 529 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 1700025B11RikA0A087WNZ6 93 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Hdac3O88895 424 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Rab6aP35279 208 aaKnown RBP12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Stx4P70452 298 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Cnep1r1Q3UJ81 125 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ccdc190Q3URK1 288 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 GalnsQ571E4 520 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 B430306N03RikQ6QX36 289 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Zfp874bQ7M6X2 447 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Plekhm1Q7TSI1 1074 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Faap24Q8BHL6 221 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 MastlQ8C0P0 865 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Klf11Q8K1S5 502 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1038Q8VGS1 319 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Yif1aQ91XB7 293 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ints12Q9D168 461 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ube2v2Q9D2M8 145 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Nubp2Q9R061 275 aa12.83□□□□□ -0.36
Nup88-202ENSMUST00000108530 Zfp942B8JJA7 486 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Dbx2F8VQH7 377 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 P04945 108 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Id1P20067 168 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Pou2f1P25425 770 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tcl1b1P56840 116 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Prdm6Q3UZD5 596 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Cd55bQ61476 407 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Pou4f3Q63955 338 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 N6amt1Q6SKR2 214 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Prss33Q80WM7 277 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 DpcdQ8BPA8 203 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 CdiptQ8VDP6 213 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr493Q8VEW5 314 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1451Q8VFX5 310 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 QprtQ91X91 299 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Thyn1Q91YJ3 226 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Bcl7bQ921K9 202 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Pga5Q9D106 387 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Trappc6bQ9D289 158 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ndrg3Q9QYF9 375 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 MvkQ9R008 395 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 S1pr3Q9Z0U9 378 aa12.82□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm28961A0A087WPA5 222 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 1700084M14RikB1AT01 78 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm1330D3Z460 184 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Pira2F8VQ94 680 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 DffbO54788 344 aaKnown RBP12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 UevldQ3U1V6 471 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Rasl10bQ5SSG5 203 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 RinlQ80UW3 563 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1501Q8VFQ3 315 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1201Q8VGF5 307 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1054Q8VGS7 312 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr974Q8VH09 310 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 BlvrbQ923D2 206 aaKnown RBP12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Vgll1Q99NC0 307 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Atp23Q9CWQ3 201 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 CmipQ9D486 773 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tomm20Q9DCC8 145 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gabrg1Q9R0Y8 465 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ighv1-76A0A0G2JFE9 117 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1109A2AT96 312 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 D7Ertd443eD2J0Y4 644 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmem44E9Q4M0 433 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm8020F6WLE9 229 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 GamtO35969 236 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Zfp11P10751 647 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmem69Q3KQJ0 245 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm11110Q3U4K9 109 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Thap4Q6P3Z3 569 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Eef1akmt1Q9CY45 214 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmem178aQ9CZ16 297 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmem50bQ9D1X9 158 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 4930503E14RikQ9D583 177 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ceacam18Q9D871 376 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Bap18Q9DCT6 171 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 PthQ9Z0L6 115 aa12.81□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1055A2AVX9 346 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Psmb1O09061 240 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 AF067061O70616 171 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Hoxb1P17919 297 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 G430049J08RikQ3TL09 166 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 ArsgQ3TYD4 525 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 TefmQ5SSK3 364 aaKnown RBP12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Vstm2lQ6PDS0 220 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Cdkl3Q8BLF2 595 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Mfsd9Q8C0T7 466 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm16503Q8C6M9 103 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Eddm3bQ8K0E4 149 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1489Q8VFQ5 313 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Cmtm3Q99LJ5 184 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Klrc3Q9QXN7 221 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Clcf1Q9QZM3 225 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm34653A0A1L1SR01 368 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tarm1B6A8R8 288 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Plscr5J3QM92 274 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Vmn2r58K7N6V2 862 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 NrasP08556 189 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms