RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	DIA2	Q08496	732 aa	Predicted RBP	3.17	□□□□□ -1.9
YPR039W	YPR039W	DCS2	Q12123	353 aa		3.17	□□□□□ -1.9
YPR039W	YPR039W	RPA135	P22138	1203 aa	Known RBP	3.16	□□□□□ -1.9
YPR039W	YPR039W	TMT1	P32643	299 aa		3.16	□□□□□ -1.9
YPR039W	YPR039W	MAL31	P38156	614 aa		3.16	□□□□□ -1.9
YPR039W	YPR039W	MUP3	P38734	546 aa		3.16	□□□□□ -1.9
YPR039W	YPR039W	YHR202W	P38887	602 aa		3.16	□□□□□ -1.9
YPR039W	YPR039W	HLJ1	P48353	224 aa		3.16	□□□□□ -1.9
YPR039W	YPR039W	ISA1	Q07821	250 aa	Predicted RBP	3.16	□□□□□ -1.9
YPR039W	YPR039W	KCC4	P25389	1037 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	YKR075C	P36155	307 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	YMC2	P38087	329 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	CKB2	P38930	258 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	MIT1	P40002	666 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	NUG1	P40010	520 aa	Known RBP	3.15	□□□□□ -1.91
YPR039W	YPR039W	BFA1	P47113	574 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	FMP30	Q02883	468 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	THI22	Q06490	572 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	CLF1	Q12309	687 aa	Predicted RBP	3.15	□□□□□ -1.91
YPR039W	YPR039W	LAM4	P38800	1345 aa		3.15	□□□□□ -1.91
YPR039W	YPR039W	PHO5	P00635	467 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	NUP1	P20676	1076 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	YMC1	P32331	307 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	PRP19	P32523	503 aa	Known RBP	3.14	□□□□□ -1.91
YPR039W	YPR039W	BIT2	P38346	545 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	TDA3	P38758	523 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	FPR3	P38911	411 aa	Known RBP	3.14	□□□□□ -1.91
YPR039W	YPR039W	BEM4	P39011	633 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	PIG2	P40187	538 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	RET2	P43621	546 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	YJR096W	P47137	282 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	RFX1	P48743	811 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	YDL086W	Q07505	273 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	THI73	Q07904	523 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	VHS3	Q08438	674 aa		3.14	□□□□□ -1.91
YPR039W	YPR039W	CHS5	Q12114	671 aa	Known RBP	3.14	□□□□□ -1.91
YPR039W	YPR039W	ERG20	P08524	352 aa	Known RBP	3.13	□□□□□ -1.91
YPR039W	YPR039W	PRP28	P23394	588 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
YPR039W	YPR039W	FEN2	P25621	512 aa	Known RBP	3.13	□□□□□ -1.91
YPR039W	YPR039W	SEC6	P32844	805 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	TYS1	P36421	394 aa	Known RBP	3.13	□□□□□ -1.91
YPR039W	YPR039W	PMC1	P38929	1173 aa	Predicted RBP	3.13	□□□□□ -1.91
YPR039W	YPR039W	YIL077C	P40508	320 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	GAT1	P43574	510 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	MPS3	P47069	682 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	YJR142W	P47173	342 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	MRK1	P50873	501 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	YMR210W	Q03649	449 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	VPS36	Q06696	566 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	SLK19	Q08581	821 aa	Known RBP	3.13	□□□□□ -1.91
YPR039W	YPR039W	POM34	Q12445	299 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	YGR161W-C	Q3E744	92 aa		3.13	□□□□□ -1.91
YPR039W	YPR039W	FRS1	P15624	595 aa	Known RBP	3.12	□□□□□ -1.91
YPR039W	YPR039W	SEC15	P22224	910 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	SAT4	P25333	603 aa	Known RBP	3.12	□□□□□ -1.91
YPR039W	YPR039W	IMG2	P25642	146 aa	Predicted RBP	3.12	□□□□□ -1.91
YPR039W	YPR039W	PET127	P32606	800 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	KHA1	P40309	873 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	XBP1	P40489	647 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	PMT3	P47190	753 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	ASN1	P49089	572 aa	Known RBP	3.12	□□□□□ -1.91
YPR039W	YPR039W	YNR029C	P53729	429 aa	Known RBP	3.12	□□□□□ -1.91
YPR039W	YPR039W	SEC5	P89102	971 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	MTQ2	Q03920	221 aa	Predicted RBP	3.12	□□□□□ -1.91
YPR039W	YPR039W	SEG1	Q04279	960 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	YLR407W	Q06070	228 aa		3.12	□□□□□ -1.91
YPR039W	YPR039W	ADE5,7	P07244	802 aa	Known RBP	3.11	□□□□□ -1.91
YPR039W	YPR039W	ABF1	P14164	731 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	PTP1	P25044	335 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	KIN82	P25341	720 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	MSS1	P32559	526 aa	Predicted RBP	3.11	□□□□□ -1.91
YPR039W	YPR039W	YKU70	P32807	602 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	YPT7	P32939	208 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	CCT5	P40413	562 aa	Known RBP	3.11	□□□□□ -1.91
YPR039W	YPR039W	TAX4	P47030	604 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	BIT61	P47041	543 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	YGR153W	P48238	217 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	DIP5	P53388	608 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	UME1	Q03010	460 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	VBA4	Q04602	768 aa	Known RBP	3.11	□□□□□ -1.91
YPR039W	YPR039W	NUP145	P49687	1317 aa		3.11	□□□□□ -1.91
YPR039W	YPR039W	RPS9B	P05755	195 aa	Known RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	SWI6	P09959	803 aa		3.1	□□□□□ -1.91
YPR039W	YPR039W	UGP1	P32861	499 aa	Known RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	CTP1	P38152	299 aa		3.1	□□□□□ -1.91
YPR039W	YPR039W	GZF3	P42944	551 aa	Known RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	BNA3	P47039	444 aa	Known RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	RCR2	Q03446	210 aa	Known RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	YTM1	Q12024	460 aa	Predicted RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	MDM20	Q12387	796 aa	Known RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	RPS21B	Q3E754	87 aa	Known RBP	3.1	□□□□□ -1.91
YPR039W	YPR039W	PRP22	P24384	1145 aa	Known RBP	3.09	□□□□□ -1.91
YPR039W	YPR039W	NTH1	P32356	751 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	COS111	P38308	924 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	PMT6	P42934	759 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	DOS2	P54858	310 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	ECM9	Q02202	377 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	HFD1	Q04458	532 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	YPS7	Q06325	596 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms