RNA–Protein interactions for RNA: YML101C

CUE4, Transcript of Protein of unknown function, yeast

Gene CUE4, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE4	YML101C	ERV41	Q04651	352 aa		7	□□□□□ -1.29
CUE4	YML101C	SIL1	Q08199	421 aa		7	□□□□□ -1.29
CUE4	YML101C	ABP140	Q08641	628 aa	Known RBP	7	□□□□□ -1.29
CUE4	YML101C	MNL2	Q12205	849 aa		7	□□□□□ -1.29
CUE4	YML101C	YDL206W	Q12424	762 aa		7	□□□□□ -1.29
CUE4	YML101C	GAL80	P04387	435 aa		6.99	□□□□□ -1.29
CUE4	YML101C	GAL10	P04397	699 aa		6.99	□□□□□ -1.29
CUE4	YML101C	ATP1	P07251	545 aa	Known RBP	6.99	□□□□□ -1.29
CUE4	YML101C	KGD2	P19262	463 aa	Predicted RBP	6.99	□□□□□ -1.29
CUE4	YML101C	COX11	P19516	300 aa	Known RBP	6.99	□□□□□ -1.29
CUE4	YML101C	VPH1	P32563	840 aa	Known RBP	6.99	□□□□□ -1.29
CUE4	YML101C	SWH1	P35845	1188 aa		6.99	□□□□□ -1.29
CUE4	YML101C	MMS21	P38632	267 aa		6.99	□□□□□ -1.29
CUE4	YML101C	POL31	P46957	487 aa		6.99	□□□□□ -1.29
CUE4	YML101C	TAD1	P53065	400 aa		6.99	□□□□□ -1.29
CUE4	YML101C	NUT1	P53114	1132 aa		6.99	□□□□□ -1.29
CUE4	YML101C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
CUE4	YML101C	MTG1	Q03151	367 aa	Predicted RBP	6.99	□□□□□ -1.29
CUE4	YML101C	YMR187C	Q03236	431 aa		6.99	□□□□□ -1.29
CUE4	YML101C	SPC24	Q04477	213 aa		6.99	□□□□□ -1.29
CUE4	YML101C	CSR1	Q06705	408 aa	Known RBP	6.99	□□□□□ -1.29
CUE4	YML101C	FRA1	Q07825	749 aa		6.99	□□□□□ -1.29
CUE4	YML101C	AIM41	Q12032	185 aa		6.99	□□□□□ -1.29
CUE4	YML101C	YPR027C	Q12079	277 aa		6.99	□□□□□ -1.29
CUE4	YML101C	SPO21	Q12411	609 aa		6.99	□□□□□ -1.29
CUE4	YML101C	SEC39	Q12745	709 aa		6.99	□□□□□ -1.29
CUE4	YML101C	LAA1	P39526	2014 aa		6.99	□□□□□ -1.29
CUE4	YML101C	JIP3	O13555	125 aa		6.98	□□□□□ -1.29
CUE4	YML101C	TRP2	P00899	507 aa	Known RBP	6.98	□□□□□ -1.29
CUE4	YML101C	CDC42	P19073	191 aa		6.98	□□□□□ -1.29
CUE4	YML101C	GAL11	P19659	1081 aa		6.98	□□□□□ -1.29
CUE4	YML101C	KIP1	P28742	1111 aa		6.98	□□□□□ -1.29
CUE4	YML101C	CCT2	P39076	527 aa	Known RBP	6.98	□□□□□ -1.29
CUE4	YML101C	SAH1	P39954	449 aa	Known RBP	6.98	□□□□□ -1.29
CUE4	YML101C	YIR016W	P40572	265 aa		6.98	□□□□□ -1.29
CUE4	YML101C	INA22	P40576	216 aa		6.98	□□□□□ -1.29
CUE4	YML101C	OYE3	P41816	400 aa	Predicted RBP	6.98	□□□□□ -1.29
CUE4	YML101C	SBE2	P42223	864 aa	Known RBP	6.98	□□□□□ -1.29
CUE4	YML101C	YDR338C	Q05497	695 aa		6.98	□□□□□ -1.29
CUE4	YML101C	YLR257W	Q06146	321 aa	Known RBP	6.98	□□□□□ -1.29
CUE4	YML101C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.98	□□□□□ -1.29	not detected
CUE4	YML101C	NCA2	Q12374	616 aa		6.98	□□□□□ -1.29
CUE4	YML101C	TY4A-H	Q6Q5P6	413 aa		6.98	□□□□□ -1.29
CUE4	YML101C	YPR117W	Q06116	2489 aa		6.98	□□□□□ -1.29
CUE4	YML101C	YMR084W	A2P2R3	262 aa		6.97	□□□□□ -1.29
CUE4	YML101C	YLR462W	O13556	202 aa		6.97	□□□□□ -1.29
CUE4	YML101C	ARG4	P04076	463 aa	Predicted RBP	6.97	□□□□□ -1.29
CUE4	YML101C	CHS1	P08004	1131 aa		6.97	□□□□□ -1.29
CUE4	YML101C	MAS1	P10507	462 aa		6.97	□□□□□ -1.29
CUE4	YML101C	RAD27	P26793	382 aa		6.97	□□□□□ -1.29
CUE4	YML101C	PLC1	P32383	869 aa		6.97	□□□□□ -1.29
CUE4	YML101C	CDC11	P32458	415 aa		6.97	□□□□□ -1.29
CUE4	YML101C	EFB1	P32471	206 aa	Known RBP	6.97	□□□□□ -1.29
CUE4	YML101C	PEX2	P32800	271 aa		6.97	□□□□□ -1.29
CUE4	YML101C	KDX1	P36005	433 aa		6.97	□□□□□ -1.29
CUE4	YML101C	AGP2	P38090	596 aa		6.97	□□□□□ -1.29
CUE4	YML101C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	6.97	□□□□□ -1.29	not detected
CUE4	YML101C	SHE3	P38272	425 aa	Known RBP	6.97	□□□□□ -1.29
CUE4	YML101C	PCM1	P38628	557 aa	Known RBP	6.97	□□□□□ -1.29
CUE4	YML101C	YHL049C	P38722	271 aa		6.97	□□□□□ -1.29
CUE4	YML101C	GEM1	P39722	662 aa		6.97	□□□□□ -1.29
CUE4	YML101C	YEL075C	P39972	122 aa		6.97	□□□□□ -1.29
CUE4	YML101C	YER189W	P40104	122 aa		6.97	□□□□□ -1.29
CUE4	YML101C	YNL320W	P42840	284 aa		6.97	□□□□□ -1.29
CUE4	YML101C	YFL064C	P43540	174 aa		6.97	□□□□□ -1.29
CUE4	YML101C	UTP6	Q02354	440 aa	Known RBP	6.97	□□□□□ -1.29
CUE4	YML101C	SHR3	Q02774	210 aa		6.97	□□□□□ -1.29
CUE4	YML101C	VPS16	Q03308	798 aa		6.97	□□□□□ -1.29
CUE4	YML101C	PPM1	Q04081	328 aa		6.97	□□□□□ -1.29
CUE4	YML101C	PIG1	Q06216	648 aa		6.97	□□□□□ -1.29
CUE4	YML101C	YBL111C	Q3E7Y5	667 aa		6.97	□□□□□ -1.29
CUE4	YML101C	ECM3	Q99252	613 aa		6.97	□□□□□ -1.29
CUE4	YML101C	TPK1	P06244	397 aa		6.96	□□□□□ -1.3
CUE4	YML101C	PEP5	P12868	1029 aa		6.96	□□□□□ -1.3
CUE4	YML101C	SPO16	P17122	198 aa		6.96	□□□□□ -1.3
CUE4	YML101C	RNR1	P21524	888 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	PGS1	P25578	521 aa		6.96	□□□□□ -1.3
CUE4	YML101C	GAC1	P28006	793 aa		6.96	□□□□□ -1.3
CUE4	YML101C	KIP2	P28743	706 aa		6.96	□□□□□ -1.3
CUE4	YML101C	PDB1	P32473	366 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	SLA2	P33338	968 aa		6.96	□□□□□ -1.3
CUE4	YML101C	YKL050C	P35736	922 aa		6.96	□□□□□ -1.3
CUE4	YML101C	BCH2	P36122	765 aa		6.96	□□□□□ -1.3
CUE4	YML101C	TIF5	P38431	405 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	HIS2	P38635	335 aa		6.96	□□□□□ -1.3
CUE4	YML101C	YHR131C	P38835	850 aa		6.96	□□□□□ -1.3
CUE4	YML101C	LCP5	P40079	357 aa	Predicted RBP	6.96	□□□□□ -1.3
CUE4	YML101C	SMX2	P40204	77 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	MAF1	P41910	395 aa		6.96	□□□□□ -1.3
CUE4	YML101C	YJR054W	P47114	497 aa		6.96	□□□□□ -1.3
CUE4	YML101C	DRN1	P53255	507 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	CPR6	P53691	371 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	YNL035C	P53962	389 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	ADA2	Q02336	434 aa		6.96	□□□□□ -1.3
CUE4	YML101C	MZM1	Q03429	123 aa	Predicted RBP	6.96	□□□□□ -1.3
CUE4	YML101C	ATG16	Q03818	150 aa		6.96	□□□□□ -1.3
CUE4	YML101C	YML082W	Q04533	649 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	TDA9	Q04545	1251 aa		6.96	□□□□□ -1.3
CUE4	YML101C	CMS1	Q07897	291 aa	Known RBP	6.96	□□□□□ -1.3
CUE4	YML101C	AI5_BETA	Q9ZZX0	354 aa		6.96	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms