RNA–Protein interactions for RNA: YKL109W

HAP4, Transcript of Transcription factor, yeast

Gene HAP4, Length 1,665 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAP4	YKL109W	MAD2	P40958	196 aa		4.61	□□□□□ -1.67
HAP4	YKL109W	MAD3	P47074	515 aa		4.61	□□□□□ -1.67
HAP4	YKL109W	TAF4	P50105	388 aa		4.61	□□□□□ -1.67
HAP4	YKL109W	MNT2	P53059	558 aa		4.61	□□□□□ -1.67
HAP4	YKL109W	ACK1	Q07622	623 aa	Predicted RBP	4.61	□□□□□ -1.67
HAP4	YKL109W	RPA135	P22138	1203 aa	Known RBP	4.6	□□□□□ -1.67
HAP4	YKL109W	ERG6	P25087	383 aa	Known RBP	4.6	□□□□□ -1.67
HAP4	YKL109W	MSH1	P25846	959 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	CDC20	P26309	610 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	MTC7	P32633	139 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	SHM2	P37291	469 aa	Known RBP	4.6	□□□□□ -1.67
HAP4	YKL109W	POL12	P38121	705 aa	Predicted RBP	4.6	□□□□□ -1.67
HAP4	YKL109W	SWD1	P39706	426 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	SPC72	P39723	622 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	TRS130	Q03660	1102 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	NSE5	Q03718	556 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	SGO1	Q08490	590 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	SSP2	Q08646	371 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	DIN7	Q12086	430 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	DFG16	Q99234	619 aa		4.6	□□□□□ -1.67
HAP4	YKL109W	RNR1	P21524	888 aa	Known RBP	4.59	□□□□□ -1.67
HAP4	YKL109W	APT2	P36973	181 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	APM3	P38153	483 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	YHR033W	P38690	423 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
HAP4	YKL109W	TEX1	P53851	422 aa	Known RBP	4.59	□□□□□ -1.67
HAP4	YKL109W	GTR1	Q00582	310 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	YLR224W	Q05947	369 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	TGL5	Q12043	749 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	TRM11	Q12463	433 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	VPS5	Q92331	675 aa		4.59	□□□□□ -1.67
HAP4	YKL109W	VAS1	P07806	1104 aa	Known RBP	4.58	□□□□□ -1.68
HAP4	YKL109W	CBP3	P21560	335 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	KAR4	P25583	335 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	BEM3	P32873	1128 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	LIP5	P32875	414 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	CTF13	P35203	478 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	PLB1	P39105	664 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	ERP2	P39704	215 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	VPS27	P40343	622 aa	Known RBP	4.58	□□□□□ -1.68
HAP4	YKL109W	PXA1	P41909	870 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	BIT61	P47041	543 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	NOP9	P47077	666 aa	Known RBP	4.58	□□□□□ -1.68
HAP4	YKL109W	COX18	P53239	316 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	YNR071C	P53757	342 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	NRG1	Q03125	231 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	EIS1	Q05050	843 aa	Known RBP	4.58	□□□□□ -1.68
HAP4	YKL109W	COG4	Q06096	861 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	MCH5	Q08777	521 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	ECM3	Q99252	613 aa		4.58	□□□□□ -1.68
HAP4	YKL109W	HRP1	Q99383	534 aa	Known RBP	4.58	□□□□□ -1.68
HAP4	YKL109W	GFA1	P14742	717 aa	Known RBP	4.57	□□□□□ -1.68
HAP4	YKL109W	PRE4	P30657	266 aa		4.57	□□□□□ -1.68
HAP4	YKL109W	SSP120	P39931	234 aa	Known RBP	4.57	□□□□□ -1.68
HAP4	YKL109W	GET2	P40056	285 aa		4.57	□□□□□ -1.68
HAP4	YKL109W	VBA4	Q04602	768 aa	Known RBP	4.57	□□□□□ -1.68
HAP4	YKL109W	BLS1	Q06071	122 aa		4.57	□□□□□ -1.68
HAP4	YKL109W	DBP10	Q12389	995 aa	Known RBP	4.57	□□□□□ -1.68
HAP4	YKL109W	ERG20	P08524	352 aa	Known RBP	4.57	□□□□□ -1.68
HAP4	YKL109W	PRM2	P40534	656 aa		4.57	□□□□□ -1.68
HAP4	YKL109W	PEF1	P53238	335 aa		4.57	□□□□□ -1.68
HAP4	YKL109W	ARC35	P53731	342 aa	Known RBP	4.57	□□□□□ -1.68
HAP4	YKL109W	ERG5	P54781	538 aa		4.57	□□□□□ -1.68
HAP4	YKL109W	GAD1	Q04792	585 aa		4.57	□□□□□ -1.68
HAP4	YKL109W	RPS13	P05756	151 aa	Known RBP	4.56	□□□□□ -1.68
HAP4	YKL109W	CDS1	P38221	457 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	LYS9	P38999	446 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	STT3	P39007	718 aa	Known RBP	4.56	□□□□□ -1.68
HAP4	YKL109W	TAF1	P46677	1066 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	IML2	P47031	731 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	SPT20	P50875	604 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	INP52	P50942	1183 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	UBA2	P52488	636 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	PPN1	Q04119	674 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	LAS17	Q12446	633 aa		4.56	□□□□□ -1.68
HAP4	YKL109W	HMG2	P12684	1045 aa		4.55	□□□□□ -1.68
HAP4	YKL109W	TSA1	P34760	196 aa	Known RBP	4.55	□□□□□ -1.68
HAP4	YKL109W	RMA1	P36001	430 aa	Known RBP	4.55	□□□□□ -1.68
HAP4	YKL109W	TAF5	P38129	798 aa		4.55	□□□□□ -1.68
HAP4	YKL109W	PSY4	P38193	441 aa		4.55	□□□□□ -1.68
HAP4	YKL109W	CPR6	P53691	371 aa	Known RBP	4.55	□□□□□ -1.68
HAP4	YKL109W	POM34	Q12445	299 aa		4.55	□□□□□ -1.68
HAP4	YKL109W	NCP1	P16603	691 aa	Known RBP	4.54	□□□□□ -1.68
HAP4	YKL109W	ARG1	P22768	420 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	CWH43	P25618	953 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	MCM10	P32354	571 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	YLF2	P38746	405 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	FKH2	P41813	862 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	YDL183C	P48569	320 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	MTL1	P53214	551 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	RGC1	Q06108	1083 aa	Known RBP	4.54	□□□□□ -1.68
HAP4	YKL109W	PHO5	P00635	467 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	URA3	P03962	267 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	PRP22	P24384	1145 aa	Known RBP	4.54	□□□□□ -1.68
HAP4	YKL109W	CAD1	P24813	409 aa	Known RBP	4.54	□□□□□ -1.68
HAP4	YKL109W	KIN82	P25341	720 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	LST4	P34239	828 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	OMA1	P36163	345 aa		4.54	□□□□□ -1.68
HAP4	YKL109W	CRG1	P38892	291 aa	RIP-Chip data	4.54	□□□□□ -1.68	not detected
HAP4	YKL109W	PUG1	P40100	303 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms