RNA–Protein interactions for RNA: YGR040W

KSS1, Transcript of Mitogen-activated protein kinase (MAPK), yeastyeast

Gene KSS1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSS1YGR040W DUT1P33317 147 aa6.32□□□□□ -1.4
KSS1YGR040W YKL091CP33324 310 aaKnown RBP6.32□□□□□ -1.4
KSS1YGR040W ERG7P38604 731 aa6.32□□□□□ -1.4
KSS1YGR040W APT1P49435 187 aaKnown RBP6.32□□□□□ -1.4
KSS1YGR040W SOL4P53315 255 aa6.32□□□□□ -1.4
KSS1YGR040W BUL2Q03758 920 aaKnown RBP6.32□□□□□ -1.4
KSS1YGR040W YLR287CQ05881 355 aa6.32□□□□□ -1.4
KSS1YGR040W YLH47Q06493 454 aa6.32□□□□□ -1.4
KSS1YGR040W SUE1Q06524 206 aa6.32□□□□□ -1.4
KSS1YGR040W CDA2Q06703 312 aa6.32□□□□□ -1.4
KSS1YGR040W GSC2P40989 1895 aa6.31□□□□□ -1.4
KSS1YGR040W SPS1P08458 490 aa6.31□□□□□ -1.4
KSS1YGR040W ISY1P21374 235 aaPredicted RBP6.31□□□□□ -1.4
KSS1YGR040W MLS1P30952 554 aa6.31□□□□□ -1.4
KSS1YGR040W TSA1P34760 196 aaKnown RBP6.31□□□□□ -1.4
KSS1YGR040W KEL1P38853 1164 aaKnown RBP6.31□□□□□ -1.4
KSS1YGR040W VPS4P52917 437 aa6.31□□□□□ -1.4
KSS1YGR040W CAF130P53280 1122 aaPredicted RBP6.31□□□□□ -1.4
KSS1YGR040W TIF35Q04067 274 aaKnown RBP6.31□□□□□ -1.4
KSS1YGR040W AIM33Q04516 312 aa6.31□□□□□ -1.4
KSS1YGR040W RCL1Q08096 367 aaPredicted RBP6.31□□□□□ -1.4
KSS1YGR040W YOL075CQ08234 1294 aa6.31□□□□□ -1.4
KSS1YGR040W PLP2Q12017 286 aa6.31□□□□□ -1.4
KSS1YGR040W HMI1Q12039 706 aa6.31□□□□□ -1.4
KSS1YGR040W GNT1Q12096 491 aa6.31□□□□□ -1.4
KSS1YGR040W RRP6Q12149 733 aaKnown RBP6.31□□□□□ -1.4
KSS1YGR040W YOR131CQ12486 218 aa6.31□□□□□ -1.4
KSS1YGR040W TRP2P00899 507 aaKnown RBP6.3□□□□□ -1.4
KSS1YGR040W TUB2P02557 457 aaKnown RBP6.3□□□□□ -1.4
KSS1YGR040W CBP1P07252 654 aa6.3□□□□□ -1.4
KSS1YGR040W HPR1P17629 752 aaKnown RBP6.3□□□□□ -1.4
KSS1YGR040W LYP1P32487 611 aa6.3□□□□□ -1.4
KSS1YGR040W STO1P34160 861 aaKnown RBP6.3□□□□□ -1.4
KSS1YGR040W STV1P37296 890 aa6.3□□□□□ -1.4
KSS1YGR040W SUL1P38359 859 aa6.3□□□□□ -1.4
KSS1YGR040W NAB3P38996 802 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
KSS1YGR040W GAA1P39012 614 aa6.3□□□□□ -1.4
KSS1YGR040W NDC80P40460 691 aa6.3□□□□□ -1.4
KSS1YGR040W YGR117CP53270 476 aa6.3□□□□□ -1.4
KSS1YGR040W MFM1Q02783 413 aa6.3□□□□□ -1.4
KSS1YGR040W YAP7Q08182 245 aa6.3□□□□□ -1.4
KSS1YGR040W RSB1Q08417 382 aa6.3□□□□□ -1.4
KSS1YGR040W YDL177CQ12257 170 aa6.3□□□□□ -1.4
KSS1YGR040W ILV1P00927 576 aaKnown RBP6.29□□□□□ -1.4
KSS1YGR040W YEL076C-AP0CX16 216 aa6.29□□□□□ -1.4
KSS1YGR040W YLR464WP0CX17 216 aa6.29□□□□□ -1.4
KSS1YGR040W UBC1P21734 215 aaKnown RBP6.29□□□□□ -1.4
KSS1YGR040W RNQ1P25367 405 aa6.29□□□□□ -1.4
KSS1YGR040W RPC53P25441 422 aa6.29□□□□□ -1.4
KSS1YGR040W TOA1P32773 286 aa6.29□□□□□ -1.4
KSS1YGR040W LTV1P34078 463 aa6.29□□□□□ -1.4
KSS1YGR040W RPC25P35718 212 aa6.29□□□□□ -1.4
KSS1YGR040W TIF4631P39935 952 aaKnown RBP6.29□□□□□ -1.4
KSS1YGR040W YEL076CP39971 216 aa6.29□□□□□ -1.4
KSS1YGR040W NUP82P40368 713 aa6.29□□□□□ -1.4
KSS1YGR040W FMS1P50264 508 aa6.29□□□□□ -1.4
KSS1YGR040W CWC22P53333 577 aaKnown RBP6.29□□□□□ -1.4
KSS1YGR040W SNO2P53823 222 aa6.29□□□□□ -1.4
KSS1YGR040W ERG5P54781 538 aa6.29□□□□□ -1.4
KSS1YGR040W SPO75Q07798 868 aa6.29□□□□□ -1.4
KSS1YGR040W NEW1Q08972 1196 aaKnown RBP6.29□□□□□ -1.4
KSS1YGR040W HIF1Q12373 385 aa6.29□□□□□ -1.4
KSS1YGR040W YER152CP10356 443 aa6.28□□□□□ -1.4
KSS1YGR040W MTF2P10849 440 aa6.28□□□□□ -1.4
KSS1YGR040W KRS1P15180 591 aaKnown RBP6.28□□□□□ -1.4
KSS1YGR040W SPO12P17123 173 aa6.28□□□□□ -1.4
KSS1YGR040W STE11P23561 717 aa6.28□□□□□ -1.4
KSS1YGR040W CDC60P26637 1090 aaKnown RBP6.28□□□□□ -1.4
KSS1YGR040W MCM7P38132 845 aa6.28□□□□□ -1.4
KSS1YGR040W PPS1P38148 807 aa6.28□□□□□ -1.4
KSS1YGR040W ETP1P38748 585 aaKnown RBP6.28□□□□□ -1.4
KSS1YGR040W SMC2P38989 1170 aaKnown RBP6.28□□□□□ -1.4
KSS1YGR040W CCC2P38995 1004 aa6.28□□□□□ -1.4
KSS1YGR040W VFA1P40080 203 aa6.28□□□□□ -1.4
KSS1YGR040W SEC9P40357 651 aa6.28□□□□□ -1.4
KSS1YGR040W SHQ1P40486 507 aaPredicted RBP6.28□□□□□ -1.4
KSS1YGR040W SEC26P41810 973 aaKnown RBP6.28□□□□□ -1.4
KSS1YGR040W HFM1P51979 1187 aa6.28□□□□□ -1.4
KSS1YGR040W SQS1P53866 767 aaKnown RBP6.28□□□□□ -1.4
KSS1YGR040W MRPL22P53881 309 aa6.28□□□□□ -1.4
KSS1YGR040W PGA2P53903 129 aa6.28□□□□□ -1.4
KSS1YGR040W SEC5P89102 971 aa6.28□□□□□ -1.4
KSS1YGR040W EEB1Q02891 456 aa6.28□□□□□ -1.4
KSS1YGR040W UME1Q03010 460 aa6.28□□□□□ -1.4
KSS1YGR040W SML1Q04964 104 aa6.28□□□□□ -1.4
KSS1YGR040W FUS2Q05670 677 aa6.28□□□□□ -1.4
KSS1YGR040W OPY2Q06810 360 aa6.28□□□□□ -1.4
KSS1YGR040W YPL216WQ08964 1102 aa6.28□□□□□ -1.4
KSS1YGR040W CWC2Q12046 339 aaPredicted RBP6.28□□□□□ -1.4
KSS1YGR040W ARP6Q12509 438 aa6.28□□□□□ -1.4
KSS1YGR040W SSB1P11484 613 aaKnown RBP6.27□□□□□ -1.41
KSS1YGR040W DPB3P27344 201 aa6.27□□□□□ -1.41
KSS1YGR040W SRB4P32569 687 aa6.27□□□□□ -1.41
KSS1YGR040W RRP1P35178 278 aaPredicted RBP6.27□□□□□ -1.41
KSS1YGR040W SIP3P38717 1229 aa6.27□□□□□ -1.41
KSS1YGR040W PIH1P38768 344 aa6.27□□□□□ -1.41
KSS1YGR040W NDT80P38830 627 aa6.27□□□□□ -1.41
KSS1YGR040W ACA1P39970 489 aa6.27□□□□□ -1.41
KSS1YGR040W SSB2P40150 613 aaKnown RBP6.27□□□□□ -1.41
KSS1YGR040W TOS3P43637 560 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms