RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C OSW7P43611 510 aa2.82□□□□□ -1.96
PCF11YDR228C MET13P53128 600 aa2.82□□□□□ -1.96
PCF11YDR228C SNF12P53628 566 aa2.82□□□□□ -1.96
PCF11YDR228C YFT2Q06676 274 aa2.82□□□□□ -1.96
PCF11YDR228C AFT2Q08957 416 aa2.82□□□□□ -1.96
PCF11YDR228C ICT1Q12385 394 aa2.82□□□□□ -1.96
PCF11YDR228C HOM2P13663 365 aaKnown RBP2.82□□□□□ -1.96
PCF11YDR228C IME1P21190 360 aa2.82□□□□□ -1.96
PCF11YDR228C MAL31P38156 614 aa2.82□□□□□ -1.96
PCF11YDR228C MGS1P40151 587 aa2.82□□□□□ -1.96
PCF11YDR228C YSH1Q06224 779 aaPredicted RBP2.82□□□□□ -1.96
PCF11YDR228C RKI1Q12189 258 aa2.82□□□□□ -1.96
PCF11YDR228C FRS1P15624 595 aaKnown RBP2.81□□□□□ -1.96
PCF11YDR228C COS111P38308 924 aa2.81□□□□□ -1.96
PCF11YDR228C YIL077CP40508 320 aa2.81□□□□□ -1.96
PCF11YDR228C BNA3P47039 444 aaKnown RBP2.81□□□□□ -1.96
PCF11YDR228C SPC98P53540 846 aa2.81□□□□□ -1.96
PCF11YDR228C GPD1Q00055 391 aaKnown RBP2.81□□□□□ -1.96
PCF11YDR228C RCR2Q03446 210 aaKnown RBP2.81□□□□□ -1.96
PCF11YDR228C SEG1Q04279 960 aa2.81□□□□□ -1.96
PCF11YDR228C HFD1Q04458 532 aa2.81□□□□□ -1.96
PCF11YDR228C IZH3Q07959 543 aa2.81□□□□□ -1.96
PCF11YDR228C VHS3Q08438 674 aa2.81□□□□□ -1.96
PCF11YDR228C ERG20P08524 352 aaKnown RBP2.8□□□□□ -1.96
PCF11YDR228C SAT4P25333 603 aaKnown RBP2.8□□□□□ -1.96
PCF11YDR228C IMG2P25642 146 aaPredicted RBP2.8□□□□□ -1.96
PCF11YDR228C YMC1P32331 307 aa2.8□□□□□ -1.96
PCF11YDR228C UGP1P32861 499 aaKnown RBP2.8□□□□□ -1.96
PCF11YDR228C APL3P38065 1025 aa2.8□□□□□ -1.96
PCF11YDR228C NMA2P53204 395 aa2.8□□□□□ -1.96
PCF11YDR228C YNL193WP53870 558 aa2.8□□□□□ -1.96
PCF11YDR228C LAM4P38800 1345 aa2.8□□□□□ -1.96
PCF11YDR228C YTA7P40340 1379 aa2.8□□□□□ -1.96
PCF11YDR228C KIN82P25341 720 aa2.79□□□□□ -1.96
PCF11YDR228C NTH1P32356 751 aa2.79□□□□□ -1.96
PCF11YDR228C TMT1P32643 299 aa2.79□□□□□ -1.96
PCF11YDR228C YKU70P32807 602 aa2.79□□□□□ -1.96
PCF11YDR228C PMC1P38929 1173 aaPredicted RBP2.79□□□□□ -1.96
PCF11YDR228C ASN1P49089 572 aaKnown RBP2.79□□□□□ -1.96
PCF11YDR228C RIM13Q03792 727 aa2.79□□□□□ -1.96
PCF11YDR228C YDR179W-AQ03983 463 aa2.79□□□□□ -1.96
PCF11YDR228C GUD1Q07729 489 aa2.79□□□□□ -1.96
PCF11YDR228C SLK19Q08581 821 aaKnown RBP2.79□□□□□ -1.96
PCF11YDR228C SWI6P09959 803 aa2.79□□□□□ -1.96
PCF11YDR228C STE12P13574 688 aa2.79□□□□□ -1.96
PCF11YDR228C PMT6P42934 759 aa2.79□□□□□ -1.96
PCF11YDR228C ORC1P54784 914 aaPredicted RBP2.79□□□□□ -1.96
PCF11YDR228C TFB2Q02939 513 aa2.79□□□□□ -1.96
PCF11YDR228C UFO1Q04511 668 aa2.79□□□□□ -1.96
PCF11YDR228C YLR407WQ06070 228 aa2.79□□□□□ -1.96
PCF11YDR228C FPR4Q06205 392 aaPredicted RBP2.79□□□□□ -1.96
PCF11YDR228C PGK1P00560 416 aaKnown RBP2.78□□□□□ -1.96
PCF11YDR228C LEU2P04173 364 aaPredicted RBP2.78□□□□□ -1.96
PCF11YDR228C STE4P18851 423 aa2.78□□□□□ -1.96
PCF11YDR228C RPA135P22138 1203 aaKnown RBP2.78□□□□□ -1.96
PCF11YDR228C RRP14P36080 434 aaKnown RBP2.78□□□□□ -1.96
PCF11YDR228C LTP1P40347 161 aa2.78□□□□□ -1.96
PCF11YDR228C YGL117WP53133 265 aa2.78□□□□□ -1.96
PCF11YDR228C DIP5P53388 608 aa2.78□□□□□ -1.96
PCF11YDR228C ARG7Q04728 441 aa2.78□□□□□ -1.96
PCF11YDR228C YPS7Q06325 596 aa2.78□□□□□ -1.96
PCF11YDR228C ULA1Q12059 462 aa2.78□□□□□ -1.96
PCF11YDR228C TPK2P06245 380 aa2.77□□□□□ -1.97
PCF11YDR228C ADE5,7P07244 802 aaKnown RBP2.77□□□□□ -1.97
PCF11YDR228C BUD8P41698 603 aa2.77□□□□□ -1.97
PCF11YDR228C VBA4Q04602 768 aaKnown RBP2.77□□□□□ -1.97
PCF11YDR228C RPL8AP17076 256 aaKnown RBP2.77□□□□□ -1.97
PCF11YDR228C MBR1P23493 339 aa2.77□□□□□ -1.97
PCF11YDR228C RET2P43621 546 aa2.77□□□□□ -1.97
PCF11YDR228C FMP30Q02883 468 aa2.77□□□□□ -1.97
PCF11YDR228C NGL2Q03264 515 aaKnown RBP2.77□□□□□ -1.97
PCF11YDR228C YMR210WQ03649 449 aa2.77□□□□□ -1.97
PCF11YDR228C STP4Q07351 490 aa2.77□□□□□ -1.97
PCF11YDR228C MDM20Q12387 796 aaKnown RBP2.77□□□□□ -1.97
PCF11YDR228C NOP14Q99207 810 aaKnown RBP2.77□□□□□ -1.97
PCF11YDR228C ELF1P36053 145 aa2.76□□□□□ -1.97
PCF11YDR228C CCT5P40413 562 aaKnown RBP2.76□□□□□ -1.97
PCF11YDR228C IES1P43579 692 aa2.76□□□□□ -1.97
PCF11YDR228C GLO1P50107 326 aa2.76□□□□□ -1.97
PCF11YDR228C CPR8P53728 308 aa2.76□□□□□ -1.97
PCF11YDR228C FDC1Q03034 503 aa2.76□□□□□ -1.97
PCF11YDR228C YAP7Q08182 245 aa2.76□□□□□ -1.97
PCF11YDR228C ERG11P10614 530 aa2.75□□□□□ -1.97
PCF11YDR228C SEC15P22224 910 aa2.75□□□□□ -1.97
PCF11YDR228C PRP22P24384 1145 aaKnown RBP2.75□□□□□ -1.97
PCF11YDR228C PRE4P30657 266 aa2.75□□□□□ -1.97
PCF11YDR228C YKR075CP36155 307 aa2.75□□□□□ -1.97
PCF11YDR228C CKB2P38930 258 aa2.75□□□□□ -1.97
PCF11YDR228C PXA1P41909 870 aa2.75□□□□□ -1.97
PCF11YDR228C ALG12P53730 551 aa2.75□□□□□ -1.97
PCF11YDR228C DAK1P54838 584 aaKnown RBP2.75□□□□□ -1.97
PCF11YDR228C RPS9BP05755 195 aaKnown RBP2.75□□□□□ -1.97
PCF11YDR228C CDS1P38221 457 aa2.75□□□□□ -1.97
PCF11YDR228C HXT6P39003 570 aaKnown RBP2.75□□□□□ -1.97
PCF11YDR228C HXT7P39004 570 aa2.75□□□□□ -1.97
PCF11YDR228C TAX4P47030 604 aa2.75□□□□□ -1.97
PCF11YDR228C YJR096WP47137 282 aa2.75□□□□□ -1.97
PCF11YDR228C PIP2P52960 996 aa2.75□□□□□ -1.97
PCF11YDR228C SPO1P53541 631 aa2.75□□□□□ -1.97
PCF11YDR228C HLR1Q04429 423 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms