RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	TUB2	P02557	457 aa	Known RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	FLP1	P03870	423 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	PPR1	P07272	904 aa	Predicted RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	KEX2	P13134	814 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	FUR1	P18562	216 aa	Known RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	CKA2	P19454	339 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	SPC29	P33419	253 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	MCX1	P38323	520 aa	Predicted RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	VPS41	P38959	992 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	SHC1	P39000	512 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	CIN4	P39110	191 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	SIT1	P39980	628 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	QRI7	P43122	407 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	TOS3	P43637	560 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	VPS4	P52917	437 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	GUP1	P53154	560 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	UTP5	Q04177	643 aa	Known RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	TDA9	Q04545	1251 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	CIA1	Q05583	330 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	VAC14	Q06708	880 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	MRL1	Q06815	381 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	KRS1	P15180	591 aa	Known RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	RAD53	P22216	821 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	SAN1	P22470	610 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	RAD57	P25301	460 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	RPC53	P25441	422 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	PGS1	P25578	521 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	VBA3	P25594	458 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	DAL1	P32375	460 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	LYP1	P32487	611 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	PAH1	P32567	862 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	UGA4	P32837	571 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	SUL1	P38359	859 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	PIH1	P38768	344 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	PAN5	P38787	379 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	DSS1	P39112	969 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	EFM4	P40516	257 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	AXL1	P40851	1208 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	PGA2	P53903	129 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	PTA1	Q01329	785 aa	Predicted RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	ARA2	Q04212	335 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	AGE1	Q04412	482 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	YKU80	Q04437	629 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	RNH1	Q04740	348 aa		4.86	□□□□□ -1.63
SWC3	YAL011W	YTM1	Q12024	460 aa	Predicted RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	HSH49	Q99181	213 aa	Predicted RBP	4.86	□□□□□ -1.63
SWC3	YAL011W	SWI5	P08153	709 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	REC107	P21651	314 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	SRO9	P25567	434 aa	Known RBP	4.85	□□□□□ -1.63
SWC3	YAL011W	MDJ1	P35191	511 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	SIP3	P38717	1229 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	KEL1	P38853	1164 aa	Known RBP	4.85	□□□□□ -1.63
SWC3	YAL011W	OAF1	P39720	1047 aa	Predicted RBP	4.85	□□□□□ -1.63
SWC3	YAL011W	NTA1	P40354	457 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	ERR3	P42222	437 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	GZF3	P42944	551 aa	Known RBP	4.85	□□□□□ -1.63
SWC3	YAL011W	SET2	P46995	733 aa	Known RBP	4.85	□□□□□ -1.63
SWC3	YAL011W	YJR096W	P47137	282 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	FMS1	P50264	508 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
SWC3	YAL011W	MFM1	Q02783	413 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	RAD33	Q04231	177 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	RKM4	Q12504	494 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	YKL068W-A	Q3E826	78 aa		4.85	□□□□□ -1.63
SWC3	YAL011W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SWC3	YAL011W	CMP2	P14747	604 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	PFK1	P16861	987 aa	Known RBP	4.84	□□□□□ -1.63
SWC3	YAL011W	PCL2	P25693	308 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	SRB4	P32569	687 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	XRS2	P33301	854 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	CNS1	P33313	385 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	NIP100	P33420	868 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	SMF1	P38925	575 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	CCT4	P39078	528 aa	Known RBP	4.84	□□□□□ -1.63
SWC3	YAL011W	RAD26	P40352	1085 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	ULP2	P40537	1034 aa	Predicted RBP	4.84	□□□□□ -1.63
SWC3	YAL011W	DAN4	P47179	1161 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	RBG2	P53295	368 aa	Known RBP	4.84	□□□□□ -1.63
SWC3	YAL011W	YAP1802	P53309	568 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	MAL13	P53338	473 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	SOV1	Q04748	898 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	ERF2	Q06551	359 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	YPR172W	Q06608	200 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	YDL057W	Q07379	328 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	ESC8	Q08119	714 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	VHS3	Q08438	674 aa		4.84	□□□□□ -1.63
SWC3	YAL011W	RRP36	Q12481	300 aa	Predicted RBP	4.84	□□□□□ -1.63
SWC3	YAL011W	SRD1	P09007	221 aa		4.83	□□□□□ -1.64
SWC3	YAL011W	ILS1	P09436	1072 aa	Known RBP	4.83	□□□□□ -1.64
SWC3	YAL011W	TUP1	P16649	713 aa		4.83	□□□□□ -1.64
SWC3	YAL011W	HPR1	P17629	752 aa	Known RBP	4.83	□□□□□ -1.64
SWC3	YAL011W	GLK1	P17709	500 aa	Known RBP	4.83	□□□□□ -1.64
SWC3	YAL011W	RPO26	P20435	155 aa		4.83	□□□□□ -1.64
SWC3	YAL011W	DAL7	P21826	554 aa		4.83	□□□□□ -1.64
SWC3	YAL011W	CMK1	P27466	446 aa	Known RBP	4.83	□□□□□ -1.64
SWC3	YAL011W	TRK2	P28584	889 aa		4.83	□□□□□ -1.64
SWC3	YAL011W	HEM12	P32347	362 aa	Predicted RBP	4.83	□□□□□ -1.64
SWC3	YAL011W	DPH2	P32461	534 aa		4.83	□□□□□ -1.64
SWC3	YAL011W	YEL043W	P32618	956 aa		4.83	□□□□□ -1.64
SWC3	YAL011W	RRP1	P35178	278 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms