RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
SPIN3-242ENST00000640577 VPS37CA5D8V6 355 aaPredicted RBP18.23■□□□□ 0.51
SPIN3-242ENST00000640577 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
SPIN3-242ENST00000640577 PDE6AP16499 860 aa18.23■□□□□ 0.51
SPIN3-242ENST00000640577 CDC37L1Q7L3B6 337 aa18.23■□□□□ 0.51
SPIN3-242ENST00000640577 CCDC24Q8N4L8 307 aa18.23■□□□□ 0.51
SPIN3-242ENST00000640577 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
SPIN3-242ENST00000640577 AFF2P51816 1311 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 UQCRFS1P1P0C7P4 283 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 MRE11P49959 708 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 LARP1BQ659C4 914 aaKnown RBP18.22■□□□□ 0.51
SPIN3-242ENST00000640577 NKX2-3Q8TAU0 364 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.22■□□□□ 0.51
SPIN3-242ENST00000640577 SCRN1Q12765 414 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
SPIN3-242ENST00000640577 AGXT2Q9BYV1 514 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 ATRNO75882 1429 aa18.22■□□□□ 0.51
SPIN3-242ENST00000640577 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
SPIN3-242ENST00000640577 HSP90B1P14625 803 aaKnown RBP18.21■□□□□ 0.51
SPIN3-242ENST00000640577 TTF1Q15361 905 aaPredicted RBP18.21■□□□□ 0.51
SPIN3-242ENST00000640577 MEX3CQ5U5Q3 659 aaKnown RBP18.21■□□□□ 0.51
SPIN3-242ENST00000640577 NBPF3Q9H094 633 aa18.21■□□□□ 0.51
SPIN3-242ENST00000640577 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
SPIN3-242ENST00000640577 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
SPIN3-242ENST00000640577 CERKQ8TCT0 537 aa18.21■□□□□ 0.51
SPIN3-242ENST00000640577 DENND2AQ9ULE3 1009 aa18.21■□□□□ 0.51
SPIN3-242ENST00000640577 ZNF445P59923 1031 aa18.2■□□□□ 0.5
SPIN3-242ENST00000640577 UBE3CQ15386 1083 aa18.2■□□□□ 0.5
SPIN3-242ENST00000640577 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
SPIN3-242ENST00000640577 COL24A1Q17RW2 1714 aa18.2■□□□□ 0.5
SPIN3-242ENST00000640577 FGD1P98174 961 aa18.2■□□□□ 0.5
SPIN3-242ENST00000640577 FAM173BQ6P4H8 233 aa18.2■□□□□ 0.5
SPIN3-242ENST00000640577 CELF1Q92879 486 aaKnown RBP18.2■□□□□ 0.5
SPIN3-242ENST00000640577 ARHGEF1Q92888 912 aaKnown RBP18.2■□□□□ 0.5
SPIN3-242ENST00000640577 IQSEC3Q9UPP2 1182 aaPredicted RBP18.2■□□□□ 0.5
SPIN3-242ENST00000640577 TMEM87AQ8NBN3 555 aa18.19■□□□□ 0.5
SPIN3-242ENST00000640577 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
SPIN3-242ENST00000640577 C4BP0C0L5 1744 aa18.19■□□□□ 0.5
SPIN3-242ENST00000640577 PFKFB2O60825 505 aa18.19■□□□□ 0.5
SPIN3-242ENST00000640577 CTDNEP1O95476 244 aa18.19■□□□□ 0.5
SPIN3-242ENST00000640577 IMMTQ16891 758 aaKnown RBP18.19■□□□□ 0.5
SPIN3-242ENST00000640577 ZSCAN25Q6NSZ9 544 aa18.19■□□□□ 0.5
SPIN3-242ENST00000640577 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
SPIN3-242ENST00000640577 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
SPIN3-242ENST00000640577 ISY1Q9ULR0 285 aaKnown RBP18.19■□□□□ 0.5
SPIN3-242ENST00000640577 FIBPO43427 364 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 PPFIA3O75145 1194 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 SLC10A5Q5PT55 438 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 MAGEB6Q8N7X4 407 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 CDC5LQ99459 802 aaKnown RBP18.18■□□□□ 0.5
SPIN3-242ENST00000640577 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
SPIN3-242ENST00000640577 CCT2P78371 535 aaKnown RBP18.18■□□□□ 0.5
SPIN3-242ENST00000640577 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
SPIN3-242ENST00000640577 MBD3O95983 291 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-242ENST00000640577 GYG1P46976 350 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 ANTXR2P58335 489 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 MB21D2Q8IYB1 491 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-242ENST00000640577 STRBPQ96SI9 672 aaKnown RBP18.17■□□□□ 0.5
SPIN3-242ENST00000640577 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
SPIN3-242ENST00000640577 SYCE3A1L190 88 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 ZPR1O75312 459 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 TBC1D10CQ8IV04 446 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 MINPP1Q9UNW1 487 aa18.17■□□□□ 0.5
SPIN3-242ENST00000640577 COL1A1P02452 1464 aaPredicted RBP18.16■□□□□ 0.5
SPIN3-242ENST00000640577 PHF14O94880 888 aa18.16■□□□□ 0.5
SPIN3-242ENST00000640577 PDIA3P30101 505 aaKnown RBP18.16■□□□□ 0.5
SPIN3-242ENST00000640577 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
SPIN3-242ENST00000640577 NSUN7Q8NE18 718 aaKnown RBP18.16■□□□□ 0.5
SPIN3-242ENST00000640577 BSDC1Q9NW68 430 aaPredicted RBP18.16■□□□□ 0.5
SPIN3-242ENST00000640577 ZNF213O14771 459 aa18.15■□□□□ 0.5
SPIN3-242ENST00000640577 SLC51AQ86UW1 340 aa18.15■□□□□ 0.5
SPIN3-242ENST00000640577 SMARCC2Q8TAQ2 1214 aa18.15■□□□□ 0.5
SPIN3-242ENST00000640577 RGL2O15211 777 aa18.15■□□□□ 0.5
SPIN3-242ENST00000640577 PDCP20941 246 aa18.15■□□□□ 0.5
SPIN3-242ENST00000640577 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
SPIN3-242ENST00000640577 ATP6V1DQ9Y5K8 247 aa18.15■□□□□ 0.5
SPIN3-242ENST00000640577 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
SPIN3-242ENST00000640577 APPP05067 770 aa18.14■□□□□ 0.5
SPIN3-242ENST00000640577 KLRK1P26718 216 aa18.14■□□□□ 0.5
SPIN3-242ENST00000640577 ARMT1Q9H993 441 aa18.14■□□□□ 0.5
SPIN3-242ENST00000640577 INCENPQ9NQS7 918 aa18.14■□□□□ 0.5
SPIN3-242ENST00000640577 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.5
SPIN3-242ENST00000640577 ZNF804BA4D1E1 1349 aa18.14■□□□□ 0.49
SPIN3-242ENST00000640577 PRC1O43663 620 aa18.14■□□□□ 0.49
SPIN3-242ENST00000640577 MBD4O95243 580 aa18.14■□□□□ 0.49
SPIN3-242ENST00000640577 MAP3K12Q12852 859 aa18.14■□□□□ 0.49
SPIN3-242ENST00000640577 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
SPIN3-242ENST00000640577 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
SPIN3-242ENST00000640577 ADGRA1Q86SQ6 560 aa18.13■□□□□ 0.49
SPIN3-242ENST00000640577 FBXL16Q8N461 479 aa18.13■□□□□ 0.49
SPIN3-242ENST00000640577 RBSNQ9H1K0 784 aa18.13■□□□□ 0.49
SPIN3-242ENST00000640577 CHD4Q14839 1912 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms