RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TMEM87AQ8NBN3 555 aa17.93■□□□□ 0.46
TRIM3-215ENST00000639856 CELF1Q92879 486 aaKnown RBP17.93■□□□□ 0.46
TRIM3-215ENST00000639856 MAST3O60307 1309 aa17.93■□□□□ 0.46
TRIM3-215ENST00000639856 TOB2Q14106 344 aaPredicted RBP17.93■□□□□ 0.46
TRIM3-215ENST00000639856 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
TRIM3-215ENST00000639856 NECAB1Q8N987 351 aa17.93■□□□□ 0.46
TRIM3-215ENST00000639856 ZNF512BQ96KM6 892 aaPredicted RBP17.93■□□□□ 0.46
TRIM3-215ENST00000639856 HELLSQ9NRZ9 838 aa17.93■□□□□ 0.46
TRIM3-215ENST00000639856 ATP6V1DQ9Y5K8 247 aa17.93■□□□□ 0.46
TRIM3-215ENST00000639856 WTIPA6NIX2 430 aaPredicted RBP17.92■□□□□ 0.46
TRIM3-215ENST00000639856 M0R2C6 588 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 ARID4AP29374 1257 aaPredicted RBP17.92■□□□□ 0.46
TRIM3-215ENST00000639856 USP48Q86UV5 1035 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 TCEANC2Q96MN5 208 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 GDPD2Q9HCC8 539 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 PDIA4P13667 645 aaKnown RBP17.92■□□□□ 0.46
TRIM3-215ENST00000639856 ADRA2BP18089 450 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 TXNRD1Q16881 649 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 OSBP2Q969R2 916 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 NEK1Q96PY6 1258 aa17.92■□□□□ 0.46
TRIM3-215ENST00000639856 CYP21A2P08686 494 aa17.91■□□□□ 0.46
TRIM3-215ENST00000639856 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
TRIM3-215ENST00000639856 PIH1D3Q9NQM4 214 aaKnown RBP17.91■□□□□ 0.46
TRIM3-215ENST00000639856 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
TRIM3-215ENST00000639856 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
TRIM3-215ENST00000639856 LRSAM1Q6UWE0 723 aa17.9■□□□□ 0.46
TRIM3-215ENST00000639856 LAMA4Q16363 1823 aa17.9■□□□□ 0.46
TRIM3-215ENST00000639856 NPHP1O15259 732 aa17.9■□□□□ 0.46
TRIM3-215ENST00000639856 GADD45BO75293 160 aaPredicted RBP17.9■□□□□ 0.46
TRIM3-215ENST00000639856 GYS1P13807 737 aa17.9■□□□□ 0.46
TRIM3-215ENST00000639856 BCAMP50895 628 aa17.9■□□□□ 0.46
TRIM3-215ENST00000639856 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
TRIM3-215ENST00000639856 SYAP1Q96A49 352 aaPredicted RBP17.9■□□□□ 0.46
TRIM3-215ENST00000639856 DSCC1Q9BVC3 393 aa17.9■□□□□ 0.46
TRIM3-215ENST00000639856 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
TRIM3-215ENST00000639856 SYCE3A1L190 88 aa17.89■□□□□ 0.45
TRIM3-215ENST00000639856 UQCRFS1P1P0C7P4 283 aa17.89■□□□□ 0.45
TRIM3-215ENST00000639856 WASHC4Q2M389 1173 aa17.89■□□□□ 0.45
TRIM3-215ENST00000639856 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
TRIM3-215ENST00000639856 CNPY2Q9Y2B0 182 aa17.89■□□□□ 0.45
TRIM3-215ENST00000639856 RBSNQ9H1K0 784 aa17.89■□□□□ 0.45
TRIM3-215ENST00000639856 MINPP1Q9UNW1 487 aa17.89■□□□□ 0.45
TRIM3-215ENST00000639856 DTNBO60941 627 aa17.88■□□□□ 0.45
TRIM3-215ENST00000639856 HSPD1P10809 573 aaKnown RBP17.88■□□□□ 0.45
TRIM3-215ENST00000639856 CCDC173Q0VFZ6 552 aa17.88■□□□□ 0.45
TRIM3-215ENST00000639856 SPATA5Q8NB90 893 aa17.88■□□□□ 0.45
TRIM3-215ENST00000639856 ANP32BQ92688 251 aaKnown RBP17.88■□□□□ 0.45
TRIM3-215ENST00000639856 PUS7LQ9H0K6 701 aaKnown RBP17.88■□□□□ 0.45
TRIM3-215ENST00000639856 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 IDH1O75874 414 aaKnown RBP17.87■□□□□ 0.45
TRIM3-215ENST00000639856 ZFYP08048 801 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-215ENST00000639856 RXRBP28702 533 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 TM4SF1P30408 202 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 CNBD1Q8NA66 436 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 PPP1R9BQ96SB3 815 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 RRAGDQ9NQL2 400 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-215ENST00000639856 VPS37CA5D8V6 355 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-215ENST00000639856 PDCP20941 246 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 RPS8P62241 208 aaKnown RBP17.87■□□□□ 0.45
TRIM3-215ENST00000639856 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
TRIM3-215ENST00000639856 SLC51AQ86UW1 340 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 APPBP2Q92624 585 aa17.87■□□□□ 0.45
TRIM3-215ENST00000639856 APBA3O96018 575 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 HMGB1P09429 215 aaKnown RBP17.86■□□□□ 0.45
TRIM3-215ENST00000639856 TTF1Q15361 905 aaPredicted RBP17.86■□□□□ 0.45
TRIM3-215ENST00000639856 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 LRRFIP1Q32MZ4 808 aaKnown RBP17.86■□□□□ 0.45
TRIM3-215ENST00000639856 SLC9C2Q5TAH2 1124 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 WWC3Q9ULE0 1092 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 DOCK2Q92608 1830 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 FOXP2O15409 715 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 ADD2P35612 726 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 UBE2HP62256 183 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
TRIM3-215ENST00000639856 TRIM44Q96DX7 344 aaPredicted RBP17.86■□□□□ 0.45
TRIM3-215ENST00000639856 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRIM3-215ENST00000639856 IQSEC3Q9UPP2 1182 aaPredicted RBP17.86■□□□□ 0.45
TRIM3-215ENST00000639856 GYG1P46976 350 aa17.85■□□□□ 0.45
TRIM3-215ENST00000639856 CSPP1Q1MSJ5 1256 aa17.85■□□□□ 0.45
TRIM3-215ENST00000639856 Q6ZUG5 572 aa17.85■□□□□ 0.45
TRIM3-215ENST00000639856 STOX1Q6ZVD7 989 aa17.85■□□□□ 0.45
TRIM3-215ENST00000639856 RGS17Q9UGC6 210 aaPredicted RBP17.85■□□□□ 0.45
TRIM3-215ENST00000639856 GTF3C6Q969F1 213 aa17.84■□□□□ 0.45
TRIM3-215ENST00000639856 FIBPO43427 364 aa17.84■□□□□ 0.45
TRIM3-215ENST00000639856 PDE6AP16499 860 aa17.84■□□□□ 0.45
TRIM3-215ENST00000639856 KLRK1P26718 216 aa17.84■□□□□ 0.45
TRIM3-215ENST00000639856 DNM1Q05193 864 aaKnown RBP17.84■□□□□ 0.45
TRIM3-215ENST00000639856 STK3Q13188 491 aa17.84■□□□□ 0.45
TRIM3-215ENST00000639856 TTLL5Q6EMB2 1281 aa17.84■□□□□ 0.45
TRIM3-215ENST00000639856 ZNF532Q9HCE3 1301 aa17.83■□□□□ 0.45
TRIM3-215ENST00000639856 GPAA1O43292 621 aa17.83■□□□□ 0.45
TRIM3-215ENST00000639856 DDR1Q08345 913 aa17.83■□□□□ 0.45
TRIM3-215ENST00000639856 UBE4AQ14139 1066 aa17.83■□□□□ 0.45
TRIM3-215ENST00000639856 DHX32Q7L7V1 743 aaKnown RBP17.83■□□□□ 0.45
TRIM3-215ENST00000639856 PLSCR1O15162 318 aa17.83■□□□□ 0.44
TRIM3-215ENST00000639856 SERPINB2P05120 415 aa17.83■□□□□ 0.44
TRIM3-215ENST00000639856 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.44
TRIM3-215ENST00000639856 TFCP2L1Q9NZI6 479 aa17.83■□□□□ 0.44
TRIM3-215ENST00000639856 COL1A1P02452 1464 aaPredicted RBP17.83■□□□□ 0.44
TRIM3-215ENST00000639856 ZNF804BA4D1E1 1349 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms