RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RPS6KA2Q15349 733 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 RLBP1P12271 317 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 MYCBPQ99417 103 aaPredicted RBP21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 TXNDC9O14530 226 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 KRT23Q9C075 422 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 HIP1RO75146 1068 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 GCKP35557 465 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 TTLL12Q14166 644 aaPredicted RBP21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 ANKRD20A3Q5VUR7 823 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 DUSP27Q5VZP5 1158 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 ADAMTS8Q9UP79 889 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 RASEFQ8IZ41 740 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 WDR70Q9NW82 654 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 KIF11P52732 1056 aa21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 KANK4Q5T7N3 995 aaPredicted RBP21.66■■□□□ 1.06
CACNA1A-257ENST00000638009 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 EVI5O60447 810 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 OPHN1O60890 802 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 DENND2CQ68D51 928 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 EXOSC9Q06265 439 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 POTEB3A0JP26 581 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 ESRRGP62508 458 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 POTEBQ6S5H4 581 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 VSIG1Q86XK7 387 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 BIN1O00499 593 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 ZNF830Q96NB3 372 aaPredicted RBP21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 P3H4Q92791 437 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 CABP5Q9NP86 173 aa21.65■■□□□ 1.06
CACNA1A-257ENST00000638009 SPECC1L-ADORA2AF8WAN1 911 aa21.64■■□□□ 1.06
CACNA1A-257ENST00000638009 LDHCP07864 332 aa21.64■■□□□ 1.06
CACNA1A-257ENST00000638009 RPGRIP1Q96KN7 1286 aa21.64■■□□□ 1.06
CACNA1A-257ENST00000638009 PAWRQ96IZ0 340 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-257ENST00000638009 AFG3L2Q9Y4W6 797 aa21.64■■□□□ 1.05
CACNA1A-257ENST00000638009 GABPB1Q06547 395 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-257ENST00000638009 DEUP1Q05D60 604 aa21.64■■□□□ 1.05
CACNA1A-257ENST00000638009 SPATS2LQ9NUQ6 558 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-257ENST00000638009 PRPF40BQ6NWY9 871 aaKnown RBP21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 NUTM1Q86Y26 1132 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 RBM26Q5T8P6 1007 aaKnown RBP21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 NCOA7Q8NI08 942 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 NSMCE1Q8WV22 266 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 TSKSQ9UJT2 592 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 ZNF530Q6P9A1 599 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 UBXN1Q04323 297 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 UAP1Q16222 522 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 ALDH1L2Q3SY69 923 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 NBPF6Q5VWK0 638 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 NBPF4Q96M43 638 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 CTTNBP2NLQ9P2B4 639 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 DAAM1Q9Y4D1 1078 aa21.63■■□□□ 1.05
CACNA1A-257ENST00000638009 BCAR3O75815 825 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 TNPO1Q92973 898 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 ANO6Q4KMQ2 910 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 ABCC11Q96J66 1382 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 ZSCAN23Q3MJ62 389 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 RPGRQ92834 1020 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 MYCNP04198 464 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 CALM1P0DP23 149 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 CALM2P0DP24 149 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 CALM3P0DP25 149 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 HPDP32754 393 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 TRIM60Q495X7 471 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 MICAL1Q8TDZ2 1067 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 FAM8A1Q9UBU6 413 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 STK24Q9Y6E0 443 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 WIZO95785 1651 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 PFDN6O15212 129 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 ATL3Q6DD88 541 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 SYCE1Q8N0S2 351 aa21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 RNF216Q9NWF9 866 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-257ENST00000638009 SMIM23A6NLE4 172 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 GJB2P29033 226 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 PTPRCP08575 1304 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 MAN1A2O60476 641 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 PTGS1P23219 599 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 RASA3Q14644 834 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 LIN9Q5TKA1 542 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 SPDYE3A6NKU9 549 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 CDR2Q01850 454 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 RRAGBQ5VZM2 374 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 TOM1L2Q6ZVM7 507 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 TLDC2A0PJX2 215 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 SLC12A2P55011 1212 aa21.61■■□□□ 1.05
CACNA1A-257ENST00000638009 FHOD3Q2V2M9 1422 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 PPP1R9AQ9ULJ8 1098 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 C8orf74Q6P047 294 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 LMNB2Q03252 620 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 PDZD8Q8NEN9 1154 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 WDR44Q5JSH3 913 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 TROVE2P10155 538 aaKnown RBP eCLIP21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 PHBP35232 272 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 ATP6V1AP38606 617 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 SCINQ9Y6U3 715 aa21.6■■□□□ 1.05
CACNA1A-257ENST00000638009 TMEM57Q8N5G2 664 aa21.59■■□□□ 1.05
CACNA1A-257ENST00000638009 RAB17Q9H0T7 212 aa21.59■■□□□ 1.05
CACNA1A-257ENST00000638009 GNAT3A8MTJ3 354 aa21.59■■□□□ 1.05
CACNA1A-257ENST00000638009 BIRC2Q13490 618 aa21.59■■□□□ 1.05
CACNA1A-257ENST00000638009 MMRN2Q9H8L6 949 aa21.59■■□□□ 1.05
CACNA1A-257ENST00000638009 TSPY2A6NKD2 308 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 649.8 ms