RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 INTS4Q96HW7 963 aaKnown RBP25.83■■□□□ 1.73
CHRNA7-228ENST00000637519 ZDHHC9Q9Y397 364 aa25.83■■□□□ 1.73
CHRNA7-228ENST00000637519 ST3GAL1Q11201 340 aa25.83■■□□□ 1.72
CHRNA7-228ENST00000637519 POTEAQ6S8J7 498 aa25.83■■□□□ 1.72
CHRNA7-228ENST00000637519 MAGEB6Q8N7X4 407 aa25.83■■□□□ 1.72
CHRNA7-228ENST00000637519 ZNF804BA4D1E1 1349 aa25.82■■□□□ 1.72
CHRNA7-228ENST00000637519 HAND2P61296 217 aa25.82■■□□□ 1.72
CHRNA7-228ENST00000637519 ME3Q16798 604 aa25.82■■□□□ 1.72
CHRNA7-228ENST00000637519 ZSCAN25Q6NSZ9 544 aa25.82■■□□□ 1.72
CHRNA7-228ENST00000637519 CCDC83Q8IWF9 413 aa25.82■■□□□ 1.72
CHRNA7-228ENST00000637519 LRRC2Q9BYS8 371 aa25.82■■□□□ 1.72
CHRNA7-228ENST00000637519 TOB2Q14106 344 aaPredicted RBP25.81■■□□□ 1.72
CHRNA7-228ENST00000637519 KRT32Q14532 448 aa25.81■■□□□ 1.72
CHRNA7-228ENST00000637519 NECAB1Q8N987 351 aa25.81■■□□□ 1.72
CHRNA7-228ENST00000637519 PLSCR1O15162 318 aa25.81■■□□□ 1.72
CHRNA7-228ENST00000637519 NUCB2P80303 420 aa25.81■■□□□ 1.72
CHRNA7-228ENST00000637519 UBE3CQ15386 1083 aa25.81■■□□□ 1.72
CHRNA7-228ENST00000637519 FAM84BQ96KN1 310 aaPredicted RBP25.81■■□□□ 1.72
CHRNA7-228ENST00000637519 DOCK2Q92608 1830 aa25.8■■□□□ 1.72
CHRNA7-228ENST00000637519 FGAP02671 866 aa25.8■■□□□ 1.72
CHRNA7-228ENST00000637519 CHAMP1Q96JM3 812 aa25.8■■□□□ 1.72
CHRNA7-228ENST00000637519 VPS37DQ86XT2 251 aa25.79■■□□□ 1.72
CHRNA7-228ENST00000637519 COL23A1Q86Y22 540 aaPredicted RBP25.79■■□□□ 1.72
CHRNA7-228ENST00000637519 AKT1S1Q96B36 256 aa25.79■■□□□ 1.72
CHRNA7-228ENST00000637519 POLRMTO00411 1230 aaKnown RBP25.79■■□□□ 1.72
CHRNA7-228ENST00000637519 GRAPQ13588 217 aa25.79■■□□□ 1.72
CHRNA7-228ENST00000637519 IL27Q8NEV9 243 aa25.79■■□□□ 1.72
CHRNA7-228ENST00000637519 GRAPLQ8TC17 118 aaPredicted RBP25.79■■□□□ 1.72
CHRNA7-228ENST00000637519 E7EWF7 191 aa25.78■■□□□ 1.72
CHRNA7-228ENST00000637519 ST5P78524 1137 aa25.78■■□□□ 1.72
CHRNA7-228ENST00000637519 MAP3K12Q12852 859 aa25.78■■□□□ 1.72
CHRNA7-228ENST00000637519 CAVIN4Q5BKX8 364 aa25.78■■□□□ 1.72
CHRNA7-228ENST00000637519 TXNRD3Q86VQ6 643 aa25.78■■□□□ 1.72
CHRNA7-228ENST00000637519 ABCF2Q9UG63 623 aa25.78■■□□□ 1.72
CHRNA7-228ENST00000637519 GBP4Q96PP9 640 aa25.77■■□□□ 1.72
CHRNA7-228ENST00000637519 LRP2BPQ9P2M1 347 aa25.77■■□□□ 1.72
CHRNA7-228ENST00000637519 LAMA4Q16363 1823 aa25.77■■□□□ 1.72
CHRNA7-228ENST00000637519 Q6ZUG5 572 aa25.76■■□□□ 1.71
CHRNA7-228ENST00000637519 CHST3Q7LGC8 479 aa25.76■■□□□ 1.71
CHRNA7-228ENST00000637519 RPGRQ92834 1020 aaKnown RBP25.76■■□□□ 1.71
CHRNA7-228ENST00000637519 TNS1Q9HBL0 1735 aaKnown RBP25.76■■□□□ 1.71
CHRNA7-228ENST00000637519 MBD4O95243 580 aa25.76■■□□□ 1.71
CHRNA7-228ENST00000637519 AIDAQ96BJ3 306 aa25.76■■□□□ 1.71
CHRNA7-228ENST00000637519 ANKRD2Q9GZV1 360 aa25.76■■□□□ 1.71
CHRNA7-228ENST00000637519 STK3Q13188 491 aa25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 ARMT1Q9H993 441 aa25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 BAG4O95429 457 aaKnown RBP25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 APPP05067 770 aa25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 MIGA1Q8NAN2 632 aa25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 GPR101Q96P66 508 aaPredicted RBP25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 GNL3LQ9NVN8 582 aaKnown RBP25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 ANKIB1Q9P2G1 1089 aa25.75■■□□□ 1.71
CHRNA7-228ENST00000637519 CRY2Q49AN0 593 aa25.74■■□□□ 1.71
CHRNA7-228ENST00000637519 FBXO33Q7Z6M2 555 aa25.74■■□□□ 1.71
CHRNA7-228ENST00000637519 ADGRA1Q86SQ6 560 aa25.74■■□□□ 1.71
CHRNA7-228ENST00000637519 STRBPQ96SI9 672 aaKnown RBP25.74■■□□□ 1.71
CHRNA7-228ENST00000637519 SH2B1Q9NRF2 756 aaPredicted RBP25.74■■□□□ 1.71
CHRNA7-228ENST00000637519 JAG2Q9Y219 1238 aa25.74■■□□□ 1.71
CHRNA7-228ENST00000637519 IMMTQ16891 758 aaKnown RBP25.73■■□□□ 1.71
CHRNA7-228ENST00000637519 ZSCAN31Q96LW9 406 aaPredicted RBP25.73■■□□□ 1.71
CHRNA7-228ENST00000637519 CTNNA3Q9UI47 895 aa25.73■■□□□ 1.71
CHRNA7-228ENST00000637519 DDX11L8A8MPP1 907 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 BRD1O95696 1058 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 ANKRD1Q15327 319 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 MSL1Q68DK7 614 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 LCORLQ8N3X6 602 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 BRF1Q92994 677 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 ALDH8A1Q9H2A2 487 aaPredicted RBP25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 RAI14Q9P0K7 980 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 SMC3Q9UQE7 1217 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 DHX32Q7L7V1 743 aaKnown RBP25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 NBPF3Q9H094 633 aa25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 EPB41L4AQ9HCS5 686 aaPredicted RBP25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.72■■□□□ 1.71
CHRNA7-228ENST00000637519 PRKAB2O43741 272 aa25.71■■□□□ 1.71
CHRNA7-228ENST00000637519 HIBADHP31937 336 aaKnown RBP25.71■■□□□ 1.71
CHRNA7-228ENST00000637519 DENND2AQ9ULE3 1009 aa25.71■■□□□ 1.71
CHRNA7-228ENST00000637519 IRS2Q9Y4H2 1338 aa25.71■■□□□ 1.71
CHRNA7-228ENST00000637519 GJB2P29033 226 aa25.7■■□□□ 1.71
CHRNA7-228ENST00000637519 CHAF1AQ13111 956 aaPredicted RBP25.7■■□□□ 1.71
CHRNA7-228ENST00000637519 CYP7A1P22680 504 aa25.7■■□□□ 1.7
CHRNA7-228ENST00000637519 DEKP35659 375 aaKnown RBP25.7■■□□□ 1.7
CHRNA7-228ENST00000637519 FGD1P98174 961 aa25.7■■□□□ 1.7
CHRNA7-228ENST00000637519 EXOSC10Q01780 885 aaKnown RBP25.7■■□□□ 1.7
CHRNA7-228ENST00000637519 MCTP1Q6DN14 999 aa25.7■■□□□ 1.7
CHRNA7-228ENST00000637519 PNPLA7Q6ZV29 1317 aa25.7■■□□□ 1.7
CHRNA7-228ENST00000637519 NKX2-3Q8TAU0 364 aa25.7■■□□□ 1.7
CHRNA7-228ENST00000637519 ZNF213O14771 459 aa25.69■■□□□ 1.7
CHRNA7-228ENST00000637519 CLEC17AQ6ZS10 378 aa25.69■■□□□ 1.7
CHRNA7-228ENST00000637519 TBC1D10CQ8IV04 446 aa25.69■■□□□ 1.7
CHRNA7-228ENST00000637519 GPHNQ9NQX3 736 aaPredicted RBP25.69■■□□□ 1.7
CHRNA7-228ENST00000637519 TRAK2O60296 914 aa25.68■■□□□ 1.7
CHRNA7-228ENST00000637519 HMGB1P09429 215 aaKnown RBP25.68■■□□□ 1.7
CHRNA7-228ENST00000637519 GPSM2P81274 684 aa25.68■■□□□ 1.7
CHRNA7-228ENST00000637519 FOXD4L6Q3SYB3 417 aaPredicted RBP25.68■■□□□ 1.7
CHRNA7-228ENST00000637519 FOXD4L3Q6VB84 417 aaPredicted RBP25.68■■□□□ 1.7
CHRNA7-228ENST00000637519 ZNF384Q8TF68 577 aa25.68■■□□□ 1.7
CHRNA7-228ENST00000637519 ANO8Q9HCE9 1232 aaPredicted RBP25.68■■□□□ 1.7
CHRNA7-228ENST00000637519 APOBRQ0VD83 1088 aa25.67■■□□□ 1.7
CHRNA7-228ENST00000637519 RBM17Q96I25 401 aaKnown RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms