RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 ZAR1Q86SH2 424 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 CEP120Q8N960 986 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 SLC38A3Q99624 504 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 PRKAG2Q9UGJ0 569 aa3.57□□□□□ -1.84
SCN1A-215ENST00000637285 ZC3H7BQ9UGR2 993 aaKnown RBP3.57□□□□□ -1.84
SCN1A-215ENST00000637285 KIF4AO95239 1232 aa3.56□□□□□ -1.84
SCN1A-215ENST00000637285 BRD2P25440 801 aaKnown RBP3.56□□□□□ -1.84
SCN1A-215ENST00000637285 C19orf57Q0VDD7 668 aa3.56□□□□□ -1.84
SCN1A-215ENST00000637285 KANK4Q5T7N3 995 aaPredicted RBP3.56□□□□□ -1.84
SCN1A-215ENST00000637285 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
SCN1A-215ENST00000637285 SMG8Q8ND04 991 aaKnown RBP3.56□□□□□ -1.84
SCN1A-215ENST00000637285 SAP130Q9H0E3 1048 aa3.56□□□□□ -1.84
SCN1A-215ENST00000637285 CYP4F12Q9HCS2 524 aa3.56□□□□□ -1.84
SCN1A-215ENST00000637285 ABI2Q9NYB9 513 aaPredicted RBP3.56□□□□□ -1.84
SCN1A-215ENST00000637285 KANSL3Q9P2N6 904 aa3.56□□□□□ -1.84
SCN1A-215ENST00000637285 SLC5A6Q9Y289 635 aa3.56□□□□□ -1.84
SCN1A-215ENST00000637285 FNDC3AQ9Y2H6 1198 aaKnown RBP3.56□□□□□ -1.84
SCN1A-215ENST00000637285 FAM196BA6NMK8 535 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 TRPA1O75762 1119 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 TIAF1O95411 115 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 ACPPP15309 386 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 UBTFP17480 764 aaKnown RBP3.55□□□□□ -1.84
SCN1A-215ENST00000637285 FKBP5Q13451 457 aaPredicted RBP3.55□□□□□ -1.84
SCN1A-215ENST00000637285 FAM26DQ5JW98 314 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 GPR152Q8TDT2 470 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 BCL7CQ8WUZ0 217 aaPredicted RBP3.55□□□□□ -1.84
SCN1A-215ENST00000637285 FAM168AQ92567 244 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 PRIMPOLQ96LW4 560 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 YIPF2Q9BWQ6 316 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 TMPRSS13Q9BYE2 586 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 VRTNQ9H8Y1 702 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 FAM13BQ9NYF5 915 aa3.55□□□□□ -1.84
SCN1A-215ENST00000637285 PDE2AO00408 941 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-215ENST00000637285 DLGAP3O95886 979 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 BNIP3Q12983 259 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 LILRA6Q6PI73 481 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 ZNF765Q7L2R6 523 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 SPRED2Q7Z698 418 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 GLMNQ92990 594 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 ARXQ96QS3 562 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 HHIPQ96QV1 700 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 SUGCTQ9HAC7 445 aa3.54□□□□□ -1.84
SCN1A-215ENST00000637285 RC3H2Q9HBD1 1191 aaKnown RBP3.54□□□□□ -1.84
SCN1A-215ENST00000637285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-215ENST00000637285 LOC100289279A0A1B0GTE1 492 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 SOX1O00570 391 aaPredicted RBP3.53□□□□□ -1.84
SCN1A-215ENST00000637285 NFICP08651 508 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 RAB6AP20340 208 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 ZAP70P43403 619 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 CYP27A1Q02318 531 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 IKBKEQ14164 716 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 C16orf46Q6P387 395 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 ATG4DQ86TL0 474 aaPredicted RBP3.53□□□□□ -1.84
SCN1A-215ENST00000637285 C2CD4AQ8NCU7 369 aaPredicted RBP3.53□□□□□ -1.84
SCN1A-215ENST00000637285 FAM200AQ8TCP9 573 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 GATA6Q92908 595 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 ELP3Q9H9T3 547 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 CNTN3Q9P232 1028 aa3.53□□□□□ -1.84
SCN1A-215ENST00000637285 NCANO14594 1321 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 B8ZZF3 427 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 PRRG2O14669 202 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 PRMT3O60678 531 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 LMOD1P29536 600 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-215ENST00000637285 SOX4Q06945 474 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-215ENST00000637285 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 EXOSC6Q5RKV6 272 aaKnown RBP3.52□□□□□ -1.85
SCN1A-215ENST00000637285 STK11IPQ8N1F8 1099 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 TMEM40Q8WWA1 233 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 EZH1Q92800 747 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-215ENST00000637285 FAM84AQ96KN4 292 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 MKNK1Q9BUB5 465 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 PPP1R12CQ9BZL4 782 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 DZANK1Q9NVP4 752 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 TMEM63CQ9P1W3 806 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 SOX13Q9UN79 622 aa3.52□□□□□ -1.85
SCN1A-215ENST00000637285 LRRC10BA6NIK2 292 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 NFKBIEO00221 500 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 TNFRSF10BO14763 440 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 RNASE1P07998 156 aaKnown RBP3.51□□□□□ -1.85
SCN1A-215ENST00000637285 CES1P23141 567 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 CFPP27918 469 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 MAP7Q14244 749 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 NAA30Q147X3 362 aaPredicted RBP3.51□□□□□ -1.85
SCN1A-215ENST00000637285 DYMQ7RTS9 669 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 ZNF438Q7Z4V0 828 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 WFDC3Q8IUB2 231 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 GLIS3Q8NEA6 775 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 TOX2Q96NM4 488 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 LGR6Q9HBX8 967 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 MBNL3Q9NUK0 354 aaKnown RBP3.51□□□□□ -1.85
SCN1A-215ENST00000637285 SALL4Q9UJQ4 1053 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 ACTL7BQ9Y614 415 aa3.51□□□□□ -1.85
SCN1A-215ENST00000637285 ZBTB39O15060 712 aa3.5□□□□□ -1.85
SCN1A-215ENST00000637285 CD8BP10966 210 aa3.5□□□□□ -1.85
SCN1A-215ENST00000637285 ADH5P11766 374 aa3.5□□□□□ -1.85
SCN1A-215ENST00000637285 FUT4P22083 530 aa3.5□□□□□ -1.85
SCN1A-215ENST00000637285 CD96P40200 585 aa3.5□□□□□ -1.85
SCN1A-215ENST00000637285 BUD31P41223 144 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-215ENST00000637285 RAP1GAPP47736 663 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms