RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	DOCK2	Q92608	1830 aa		18.93	■□□□□ 0.62
CACNA1A-231	ENST00000636816	DDR1	Q08345	913 aa		18.93	■□□□□ 0.62
CACNA1A-231	ENST00000636816	TPCN1	Q9ULQ1	816 aa		18.93	■□□□□ 0.62
CACNA1A-231	ENST00000636816	NUCB2	P80303	420 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	TOB2	Q14106	344 aa	Predicted RBP	18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	UBE3C	Q15386	1083 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	ME3	Q16798	604 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	POTEA	Q6S8J7	498 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	FAM84B	Q96KN1	310 aa	Predicted RBP	18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	TFCP2L1	Q9NZI6	479 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	ZNF804B	A4D1E1	1349 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	FGA	P02671	866 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	KRT32	Q14532	448 aa		18.92	■□□□□ 0.62
CACNA1A-231	ENST00000636816	ST3GAL1	Q11201	340 aa		18.91	■□□□□ 0.62
CACNA1A-231	ENST00000636816	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.91	■□□□□ 0.62
CACNA1A-231	ENST00000636816	MAGEB6	Q8N7X4	407 aa		18.91	■□□□□ 0.62
CACNA1A-231	ENST00000636816	NECAB1	Q8N987	351 aa		18.91	■□□□□ 0.62
CACNA1A-231	ENST00000636816	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.91	■□□□□ 0.62
CACNA1A-231	ENST00000636816	AKT1S1	Q96B36	256 aa		18.91	■□□□□ 0.62
CACNA1A-231	ENST00000636816	COL23A1	Q86Y22	540 aa	Predicted RBP	18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816	CCDC83	Q8IWF9	413 aa		18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816		E7EWF7	191 aa		18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816	POLRMT	O00411	1230 aa	Known RBP	18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816	HAND2	P61296	217 aa		18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816	LRRC2	Q9BYS8	371 aa		18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816	COL1A1	P02452	1464 aa	Predicted RBP	18.9	■□□□□ 0.62
CACNA1A-231	ENST00000636816	MAP3K12	Q12852	859 aa		18.89	■□□□□ 0.61
CACNA1A-231	ENST00000636816	CAVIN4	Q5BKX8	364 aa		18.89	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.89	■□□□□ 0.61
CACNA1A-231	ENST00000636816	GRAP	Q13588	217 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	FBXO33	Q7Z6M2	555 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	TXNRD3	Q86VQ6	643 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	GRAPL	Q8TC17	118 aa	Predicted RBP	18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	CHAMP1	Q96JM3	812 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ANKRD2	Q9GZV1	360 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	BAG4	O95429	457 aa	Known RBP	18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816		Q6ZUG5	572 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	VPS37D	Q86XT2	251 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	GBP4	Q96PP9	640 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	LRP2BP	Q9P2M1	347 aa		18.88	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ST5	P78524	1137 aa		18.87	■□□□□ 0.61
CACNA1A-231	ENST00000636816	STRBP	Q96SI9	672 aa	Known RBP	18.87	■□□□□ 0.61
CACNA1A-231	ENST00000636816	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.87	■□□□□ 0.61
CACNA1A-231	ENST00000636816	GNL3L	Q9NVN8	582 aa	Known RBP	18.87	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ABCF2	Q9UG63	623 aa		18.87	■□□□□ 0.61
CACNA1A-231	ENST00000636816	CRY2	Q49AN0	593 aa		18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	CLEC17A	Q6ZS10	378 aa		18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	CHST3	Q7LGC8	479 aa		18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	RPGR	Q92834	1020 aa	Known RBP	18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ARMT1	Q9H993	441 aa		18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	CTNNA3	Q9UI47	895 aa		18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ANKRD1	Q15327	319 aa		18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	DHX32	Q7L7V1	743 aa	Known RBP	18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	AIDA	Q96BJ3	306 aa		18.86	■□□□□ 0.61
CACNA1A-231	ENST00000636816	TNS1	Q9HBL0	1735 aa	Known RBP	18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	MBD4	O95243	580 aa		18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	APP	P05067	770 aa		18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	EXOSC10	Q01780	885 aa	Known RBP	18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	STK3	Q13188	491 aa		18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	IMMT	Q16891	758 aa	Known RBP	18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ADGRA1	Q86SQ6	560 aa		18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	IRS2	Q9Y4H2	1338 aa		18.85	■□□□□ 0.61
CACNA1A-231	ENST00000636816	BRD1	O95696	1058 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	HIBADH	P31937	336 aa	Known RBP	18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	GPR101	Q96P66	508 aa	Predicted RBP	18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	NBPF3	Q9H094	633 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ANKIB1	Q9P2G1	1089 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	SMC3	Q9UQE7	1217 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	DDX11L8	A8MPP1	907 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	PRKAB2	O43741	272 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	MIGA1	Q8NAN2	632 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	BRF1	Q92994	677 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	RAI14	Q9P0K7	980 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	DENND2A	Q9ULE3	1009 aa		18.84	■□□□□ 0.61
CACNA1A-231	ENST00000636816	ZNF213	O14771	459 aa		18.83	■□□□□ 0.61
CACNA1A-231	ENST00000636816	TRAK2	O60296	914 aa		18.83	■□□□□ 0.61
CACNA1A-231	ENST00000636816	HMGB1	P09429	215 aa	Known RBP	18.83	■□□□□ 0.61
CACNA1A-231	ENST00000636816	LCORL	Q8N3X6	602 aa		18.83	■□□□□ 0.61
CACNA1A-231	ENST00000636816	MYH13	Q9UKX3	1938 aa		18.83	■□□□□ 0.6
CACNA1A-231	ENST00000636816	CYP7A1	P22680	504 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	GJB2	P29033	226 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	DEK	P35659	375 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	GPSM2	P81274	684 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	NKX2-3	Q8TAU0	364 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	ZNF384	Q8TF68	577 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	JAG2	Q9Y219	1238 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	MCTP1	Q6DN14	999 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	NLGN1	Q8N2Q7	840 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	RBM17	Q96I25	401 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	PNPLA7	Q6ZV29	1317 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	ANKRD31	Q8N7Z5	1873 aa		18.82	■□□□□ 0.6
CACNA1A-231	ENST00000636816	GSG1L2	A8MUP6	293 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	PATL2	C9JE40	543 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	IFNL3	Q8IZI9	196 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	GPHN	Q9NQX3	736 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	CACNA1S	Q13698	1873 aa		18.81	■□□□□ 0.6
CACNA1A-231	ENST00000636816	SYT1	P21579	422 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms