RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PHRF1Q9P1Y6 1649 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 ERICH4A6NGS2 130 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 EFCAB8A8MWE9 144 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 FANCCQ00597 558 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 NCAPHQ15003 741 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 DNAI1Q9UI46 699 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 PSME1Q06323 249 aa17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 RGS22Q8NE09 1264 aa17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 MYD88Q99836 296 aa17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 ST7Q9NRC1 585 aa17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 PXDNQ92626 1479 aa17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 ZNF202O95125 648 aa17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 CDK11BP21127 795 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 TSPYL1Q9H0U9 437 aa17.15■□□□□ 0.34
CACNA1A-220ENST00000635988 LAMA4Q16363 1823 aa17.14■□□□□ 0.34
CACNA1A-220ENST00000635988 ZSCAN12O43309 604 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 CMA1P23946 247 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 PLA2G4AP47712 749 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 CCDC158Q5M9N0 1113 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 SYNE3Q6ZMZ3 975 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 C8orf76Q96K31 380 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 NEDD4P46934 1319 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 FDPSP14324 419 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 SLC20A2Q08357 652 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 NDUFB9Q9Y6M9 179 aa17.14■□□□□ 0.33
CACNA1A-220ENST00000635988 GOLGA6L9A6NEM1 432 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 MYSM1Q5VVJ2 828 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 XAGE3Q8WTP9 111 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 TMX1Q9H3N1 280 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 TADA3O75528 432 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 HSPD1P10809 573 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 TRIM65Q6PJ69 517 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 LRRN4CLQ8ND94 238 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 MPHOSPH8Q99549 860 aa17.13■□□□□ 0.33
CACNA1A-220ENST00000635988 TULP2O00295 520 aa17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 CHGBP05060 677 aa17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 BIN1O00499 593 aa17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 URI1O94763 535 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 UBASH3AP57075 661 aa17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 TXLNBQ8N3L3 684 aa17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 GPR108Q9NPR9 543 aa17.12■□□□□ 0.33
CACNA1A-220ENST00000635988 MYL5Q02045 173 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 TUBE1Q9UJT0 475 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 RGPD2P0DJD1 1756 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 GOLIM4O00461 696 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 SERPINC1P01008 464 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 MYL6BP14649 208 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 PFKFB1P16118 471 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 ANO1Q5XXA6 986 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 ZNF790Q6PG37 636 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
CACNA1A-220ENST00000635988 ARHGAP6O43182 974 aa17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 KCNA6P17658 529 aa17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 GPS2Q13227 327 aa17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 REXO1L1PQ8IX06 675 aa17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 THEMISQ8N1K5 641 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 GPR161Q8N6U8 529 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 JMYQ8N9B5 988 aa17.1■□□□□ 0.33
CACNA1A-220ENST00000635988 ADAMTS7Q9UKP4 1686 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 CARD6Q9BX69 1037 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 UBXN6Q9BZV1 441 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 SLC39A14Q15043 492 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
CACNA1A-220ENST00000635988 SYKP43405 635 aa17.08■□□□□ 0.33
CACNA1A-220ENST00000635988 UTP14AQ9BVJ6 771 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-220ENST00000635988 HSD3B7Q9H2F3 369 aa17.08■□□□□ 0.33
CACNA1A-220ENST00000635988 MAST3O60307 1309 aa17.08■□□□□ 0.32
CACNA1A-220ENST00000635988 CPLX1O14810 134 aa17.08■□□□□ 0.32
CACNA1A-220ENST00000635988 ATP1A3P13637 1013 aa17.08■□□□□ 0.32
CACNA1A-220ENST00000635988 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
CACNA1A-220ENST00000635988 SLIT3O75094 1523 aa17.08■□□□□ 0.32
CACNA1A-220ENST00000635988 SETD1BQ9UPS6 1966 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 PPFIA3O75145 1194 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 PPP6R2O75170 966 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 CHST3Q7LGC8 479 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms