RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 CHST3Q7LGC8 479 aa21.34■■□□□ 1.01
CLN5-206ENST00000635915 NYXQ9GZU5 481 aa21.34■■□□□ 1.01
CLN5-206ENST00000635915 WDR33Q9C0J8 1336 aaKnown RBP21.34■■□□□ 1.01
CLN5-206ENST00000635915 SKOR2Q2VWA4 1001 aaPredicted RBP21.33■■□□□ 1.01
CLN5-206ENST00000635915 BRF1Q92994 677 aa21.33■■□□□ 1.01
CLN5-206ENST00000635915 STX6O43752 255 aa21.33■■□□□ 1
CLN5-206ENST00000635915 TRIM37O94972 964 aa21.33■■□□□ 1
CLN5-206ENST00000635915 C4AP0C0L4 1744 aa21.33■■□□□ 1
CLN5-206ENST00000635915 RGL2O15211 777 aa21.32■■□□□ 1
CLN5-206ENST00000635915 PTMSP20962 102 aa21.32■■□□□ 1
CLN5-206ENST00000635915 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
CLN5-206ENST00000635915 NLRP3Q96P20 1036 aa21.32■■□□□ 1
CLN5-206ENST00000635915 BSDC1Q9NW68 430 aaPredicted RBP21.32■■□□□ 1
CLN5-206ENST00000635915 MINPP1Q9UNW1 487 aa21.32■■□□□ 1
CLN5-206ENST00000635915 NPHP1O15259 732 aa21.32■■□□□ 1
CLN5-206ENST00000635915 GYG1P46976 350 aa21.32■■□□□ 1
CLN5-206ENST00000635915 FGD1P98174 961 aa21.32■■□□□ 1
CLN5-206ENST00000635915 TPTE2Q6XPS3 522 aa21.32■■□□□ 1
CLN5-206ENST00000635915 TCRBV5S4A2TA0A5A2 114 aa21.31■■□□□ 1
CLN5-206ENST00000635915 DHX32Q7L7V1 743 aaKnown RBP21.31■■□□□ 1
CLN5-206ENST00000635915 NCLP19338 710 aaKnown RBP21.31■■□□□ 1
CLN5-206ENST00000635915 UBE3CQ15386 1083 aa21.31■■□□□ 1
CLN5-206ENST00000635915 GDPD2Q9HCC8 539 aa21.31■■□□□ 1
CLN5-206ENST00000635915 BRWD3Q6RI45 1802 aa21.31■■□□□ 1
CLN5-206ENST00000635915 COL24A1Q17RW2 1714 aa21.31■■□□□ 1
CLN5-206ENST00000635915 TCHHQ07283 1943 aa21.3■■□□□ 1
CLN5-206ENST00000635915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.3■■□□□ 1
CLN5-206ENST00000635915 ZSCAN22P10073 491 aaPredicted RBP21.3■■□□□ 1
CLN5-206ENST00000635915 KRT27Q7Z3Y8 459 aa21.3■■□□□ 1
CLN5-206ENST00000635915 MAGEB6Q8N7X4 407 aa21.3■■□□□ 1
CLN5-206ENST00000635915 NFIXQ14938 502 aa21.3■■□□□ 1
CLN5-206ENST00000635915 SLC51AQ86UW1 340 aa21.3■■□□□ 1
CLN5-206ENST00000635915 EXOSC10Q01780 885 aaKnown RBP21.29■■□□□ 1
CLN5-206ENST00000635915 KLHL40Q2TBA0 621 aa21.29■■□□□ 1
CLN5-206ENST00000635915 CTNNA3Q9UI47 895 aa21.29■■□□□ 1
CLN5-206ENST00000635915 HMGB1P09429 215 aaKnown RBP21.29■■□□□ 1
CLN5-206ENST00000635915 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
CLN5-206ENST00000635915 IMMTQ16891 758 aaKnown RBP21.29■■□□□ 1
CLN5-206ENST00000635915 APPP05067 770 aa21.28■■□□□ 1
CLN5-206ENST00000635915 KLRK1P26718 216 aa21.28■■□□□ 1
CLN5-206ENST00000635915 APOBRQ0VD83 1088 aa21.28■■□□□ 1
CLN5-206ENST00000635915 GPT2Q8TD30 523 aa21.28■■□□□ 1
CLN5-206ENST00000635915 VPS37CA5D8V6 355 aaPredicted RBP21.28■■□□□ 1
CLN5-206ENST00000635915 GPHNQ9NQX3 736 aaPredicted RBP21.28■■□□□ 1
CLN5-206ENST00000635915 A0A1B0GUL6 1792 aa21.28■■□□□ 1
CLN5-206ENST00000635915 JAK2O60674 1132 aa21.27■■□□□ 1
CLN5-206ENST00000635915 MAP3K12Q12852 859 aa21.27■■□□□ 1
CLN5-206ENST00000635915 GTF3C6Q969F1 213 aa21.27■■□□□ 1
CLN5-206ENST00000635915 NSFL1CQ9UNZ2 370 aaKnown RBP21.27■■□□□ 1
CLN5-206ENST00000635915 MTMR6Q9Y217 621 aa21.27■■□□□ 1
CLN5-206ENST00000635915 AIDAQ96BJ3 306 aa21.27■■□□□ 1
CLN5-206ENST00000635915 TM4SF1P30408 202 aa21.26■□□□□ 0.99
CLN5-206ENST00000635915 NBPF3Q9H094 633 aa21.26■□□□□ 0.99
CLN5-206ENST00000635915 DENND2AQ9ULE3 1009 aa21.26■□□□□ 0.99
CLN5-206ENST00000635915 MBD4O95243 580 aa21.26■□□□□ 0.99
CLN5-206ENST00000635915 F13A1P00488 732 aa21.26■□□□□ 0.99
CLN5-206ENST00000635915 UBE4AQ14139 1066 aa21.26■□□□□ 0.99
CLN5-206ENST00000635915 CAVIN1Q6NZI2 390 aaKnown RBP21.26■□□□□ 0.99
CLN5-206ENST00000635915 STRBPQ96SI9 672 aaKnown RBP21.26■□□□□ 0.99
CLN5-206ENST00000635915 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
CLN5-206ENST00000635915 TNRC6CQ9HCJ0 1690 aaKnown RBP21.26■□□□□ 0.99
CLN5-206ENST00000635915 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 ZNF213O14771 459 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 LARP1BQ659C4 914 aaKnown RBP21.25■□□□□ 0.99
CLN5-206ENST00000635915 ARMT1Q9H993 441 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 LRP2BPQ9P2M1 347 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 ABCF2Q9UG63 623 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 GOLGA6L3A6NEY3 463 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 SCRN1Q12765 414 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 NKX2-3Q8TAU0 364 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 ZNF804BA4D1E1 1349 aa21.25■□□□□ 0.99
CLN5-206ENST00000635915 COL1A1P02452 1464 aaPredicted RBP21.25■□□□□ 0.99
CLN5-206ENST00000635915 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 FSD2A1L4K1 749 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 FAM84BQ96KN1 310 aaPredicted RBP21.24■□□□□ 0.99
CLN5-206ENST00000635915 RBM27Q9P2N5 1060 aaKnown RBP21.24■□□□□ 0.99
CLN5-206ENST00000635915 CNPY2Q9Y2B0 182 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 PPFIA3O75145 1194 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 GAS2L3Q86XJ1 694 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 VPS37DQ86XT2 251 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 CNBD1Q8NA66 436 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 MIGA1Q8NAN2 632 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 AGXT2Q9BYV1 514 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 NCOA5Q9HCD5 579 aaKnown RBP21.24■□□□□ 0.99
CLN5-206ENST00000635915 UBR3Q6ZT12 1888 aa21.24■□□□□ 0.99
CLN5-206ENST00000635915 CCT2P78371 535 aaKnown RBP21.23■□□□□ 0.99
CLN5-206ENST00000635915 CDC37L1Q7L3B6 337 aa21.23■□□□□ 0.99
CLN5-206ENST00000635915 TBC1D10CQ8IV04 446 aa21.23■□□□□ 0.99
CLN5-206ENST00000635915 DDX11Q96FC9 970 aa21.23■□□□□ 0.99
CLN5-206ENST00000635915 PRKAB2O43741 272 aa21.23■□□□□ 0.99
CLN5-206ENST00000635915 FERMT3Q86UX7 667 aa21.23■□□□□ 0.99
CLN5-206ENST00000635915 EPB41L4AQ9HCS5 686 aaPredicted RBP21.23■□□□□ 0.99
CLN5-206ENST00000635915 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
CLN5-206ENST00000635915 GYS1P13807 737 aa21.22■□□□□ 0.99
CLN5-206ENST00000635915 TPRNQ4KMQ1 711 aa21.22■□□□□ 0.99
CLN5-206ENST00000635915 CAVIN4Q5BKX8 364 aa21.22■□□□□ 0.99
CLN5-206ENST00000635915 USP48Q86UV5 1035 aa21.22■□□□□ 0.99
CLN5-206ENST00000635915 PROM2Q8N271 834 aa21.22■□□□□ 0.99
CLN5-206ENST00000635915 GADD45BO75293 160 aaPredicted RBP21.22■□□□□ 0.99
CLN5-206ENST00000635915 ANTXR2P58335 489 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms