RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 ODF2LQ9ULJ1 636 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 LRMPQ12912 555 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 CCDC38Q502W7 563 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 SRLQ86TD4 932 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 TADA2BQ86TJ2 420 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 CTIFO43310 598 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 KMT5BQ4FZB7 885 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 MUM1L1Q5H9M0 696 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 NUDT16Q96DE0 195 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 ZEB2O60315 1214 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 SLC52A1Q9NWF4 448 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 TNNQ9UQP3 1299 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 PICALMQ13492 652 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 JPH2Q9BR39 696 aaPredicted RBP11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 ZBTB3Q9H5J0 574 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 WWC3Q9ULE0 1092 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 TSPY3P0CV98 308 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 TSPY8P0CW00 308 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 SNX16P57768 344 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 CCDC129Q6ZRS4 1044 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 DDX12PQ92771 950 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 GLRX3O76003 335 aaKnown RBP11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 KRT13P13646 458 aa11.1□□□□□ -0.63
SPTAN1-228ENST00000635853 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 A0A1W2PRG0 241 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 MCM10Q7L590 875 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 FBF1Q8TES7 1133 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 IQCGQ9H095 443 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 ORC3Q9UBD5 711 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 SH3GL3Q99963 347 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 CCDC8Q9H0W5 538 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 EXOC1Q9NV70 894 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 TTC41PQ6P2S7 1318 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 PHLPP2Q6ZVD8 1323 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 LPXNO60711 386 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 PLEKHM2Q8IWE5 1019 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 BAG1Q99933 345 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 IMPG2Q9BZV3 1241 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 EXOC6BQ9Y2D4 811 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 BIN1O00499 593 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 TRAF1Q13077 416 aa11.09□□□□□ -0.63
SPTAN1-228ENST00000635853 PSMC4P43686 418 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 KARSQ15046 597 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 MFSD6Q6ZSS7 791 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 MRFAP1L1Q96HT8 127 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 PARP3Q9Y6F1 533 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 PTPRKQ15262 1439 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 GJC1P36383 396 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 MXRA7P84157 204 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 LUC7L3O95232 432 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 IFI16Q16666 785 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 CCDC152Q4G0S7 254 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 PYM1Q9BRP8 204 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 TCHPQ9BT92 498 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 TAF7Q15545 349 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 CCDC63Q8NA47 563 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 JDP2Q8WYK2 163 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 RABGGTAQ92696 567 aa11.08□□□□□ -0.64
SPTAN1-228ENST00000635853 KIF21AQ7Z4S6 1674 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 GOLGA8KD6RF30 607 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 LACTBP83111 547 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 DONSONQ9NYP3 566 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 ATP11AP98196 1134 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 PPP1R13BQ96KQ4 1090 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 CCT2P78371 535 aaKnown RBP11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 PPFIA1Q13136 1202 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 MRPS27Q92552 414 aaKnown RBP11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 PPFIA4O75335 1185 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 JADE2Q9NQC1 790 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 FCHSD2O94868 740 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 CALM1P0DP23 149 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 CALM2P0DP24 149 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 CALM3P0DP25 149 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 PEX19P40855 299 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 CAPS2Q9BXY5 557 aa11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 CWC25Q9NXE8 425 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-228ENST00000635853 RTL1A6NKG5 1358 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 RPGRIP1LQ68CZ1 1315 aa11.06□□□□□ -0.64
SPTAN1-228ENST00000635853 GOLGA6BA6NDN3 693 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms