RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 TREML1Q86YW5 311 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 C12orf50Q8NA57 414 aaPredicted RBP2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 ADAMTS19Q8TE59 1207 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 TMEM40Q8WWA1 233 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 LIN37Q96GY3 246 aaPredicted RBP2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 POP1Q99575 1024 aaKnown RBP2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 METTL22Q9BUU2 404 aaPredicted RBP2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 ALG2Q9H553 416 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 KCNK12Q9HB15 430 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 PRDM7Q9NQW5 492 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 FAM53CQ9NYF3 392 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 CRIM1Q9NZV1 1036 aa2.95□□□□□ -1.94
SPTAN1-216ENST00000629047 PITPNM2Q9BZ72 1349 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 H3BRJ5 948 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 DYNC1LI2O43237 492 aaPredicted RBP2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 C1QTNF9P0C862 333 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 HOXA5P20719 270 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 FUT4P22083 530 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 RANGAP1P46060 587 aaPredicted RBP2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 CTSWP56202 376 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 PLD6Q8N2A8 252 aaKnown RBP2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 FAM181AQ8N9Y4 354 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 NFATC2IPQ8NCF5 419 aa2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 C2CD4AQ8NCU7 369 aaPredicted RBP2.94□□□□□ -1.94
SPTAN1-216ENST00000629047 LZTS3O60299 673 aaPredicted RBP2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 SMNDC1O75940 238 aaKnown RBP eCLIP2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 TSPAN15O95858 294 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 NEFLP07196 543 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 RAB6AP20340 208 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 SOX11P35716 441 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 ATP1A2P50993 1020 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 WASHC4Q2M389 1173 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 LARGE2Q8N3Y3 721 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 OR13H1Q8NG92 308 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 ZSCAN18Q8TBC5 510 aaPredicted RBP2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 UBE2Q2Q8WVN8 375 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 USP26Q9BXU7 913 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 TMPRSS13Q9BYE2 586 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 PBX4Q9BYU1 374 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 LGR6Q9HBX8 967 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 KANSL3Q9P2N6 904 aa2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 MKRN1Q9UHC7 482 aaKnown RBP2.93□□□□□ -1.94
SPTAN1-216ENST00000629047 LOC100289279A0A1B0GTE1 492 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 PALM3A6NDB9 673 aaPredicted RBP2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 POM121CA8CG34 1229 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 NFICP08651 508 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 PIP4K2BP78356 416 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 HYAL2Q12891 473 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 FYB2Q5VWT5 728 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 NUTM2GQ5VZR2 741 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 PRR23BQ6ZRT6 265 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 SYDE1Q6ZW31 735 aaPredicted RBP2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 GGNQ86UU5 652 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 NLRP13Q86W25 1043 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 PLEKHM2Q8IWE5 1019 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 ETFBKMTQ8IXQ9 262 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 CACTIN-AS1Q8N1I8 211 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 HINFPQ9BQA5 517 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 ADAM19Q9H013 955 aa2.92□□□□□ -1.94
SPTAN1-216ENST00000629047 NPIPB6E9PJ23 425 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 SUPT5HO00267 1087 aaKnown RBP2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 KIF4AO95239 1232 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 CTSBP07858 339 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 PTPRAP18433 802 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 IGFBP4P22692 258 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 USP11P51784 963 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 C11orf91Q3C1V1 193 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 SIAH1Q8IUQ4 282 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 CEP120Q8N960 986 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 SMG8Q8ND04 991 aaKnown RBP2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 EZH1Q92800 747 aaPredicted RBP2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 C11orf16Q9NQ32 467 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 ACTL7BQ9Y614 415 aa2.91□□□□□ -1.94
SPTAN1-216ENST00000629047 A0A0G2JLL6 359 aaPredicted RBP2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 UBAP1LF5GYI3 381 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 SCNN1AP37088 669 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 SEC13P55735 322 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 NEUROD2Q15784 382 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 ZSWIM9Q86XI8 627 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 BHLHE22Q8NFJ8 381 aaPredicted RBP2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 PI4K2BQ8TCG2 481 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 MYO19Q96H55 970 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 CSRNP1Q96S65 589 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 SUGCTQ9HAC7 445 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 PRM3Q9NNZ6 103 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 OSGEPQ9NPF4 335 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 C1GALT1Q9NS00 363 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 RAPGEFL1Q9UHV5 662 aa2.9□□□□□ -1.95
SPTAN1-216ENST00000629047 NFKBIEO00221 500 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 SOX1O00570 391 aaPredicted RBP2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 ADH5P11766 374 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 C19orf57Q0VDD7 668 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 KCNMB1Q16558 191 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 CRTC2Q53ET0 693 aaPredicted RBP2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 COX20Q5RI15 118 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 DUSP27Q5VZP5 1158 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 ANKLE2Q86XL3 938 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 SPACA7Q96KW9 195 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 SAP130Q9H0E3 1048 aa2.89□□□□□ -1.95
SPTAN1-216ENST00000629047 SEMA6CQ9H3T2 930 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms