RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ADD2P35612 726 aa23.42■■□□□ 1.34
TREX1-205ENST00000625293 CDC5LQ99459 802 aaKnown RBP23.42■■□□□ 1.34
TREX1-205ENST00000625293 PIH1D3Q9NQM4 214 aaKnown RBP23.42■■□□□ 1.34
TREX1-205ENST00000625293 CCDC83Q8IWF9 413 aa23.41■■□□□ 1.34
TREX1-205ENST00000625293 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.41■■□□□ 1.34
TREX1-205ENST00000625293 PPP1R1BQ9UD71 204 aaPredicted RBP23.41■■□□□ 1.34
TREX1-205ENST00000625293 SNAP23O00161 211 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 RFC4P35249 363 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 CHRNDQ07001 517 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 MCTP1Q6DN14 999 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 ZSCAN25Q6NSZ9 544 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 TCEANC2Q96MN5 208 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 NYXQ9GZU5 481 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 PUS7LQ9H0K6 701 aaKnown RBP23.4■■□□□ 1.34
TREX1-205ENST00000625293 WASHC4Q2M389 1173 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 BICDL1Q6ZP65 573 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 LMBRD1Q9NUN5 540 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 SMC3Q9UQE7 1217 aa23.4■■□□□ 1.34
TREX1-205ENST00000625293 MYH7P12883 1935 aa23.39■■□□□ 1.34
TREX1-205ENST00000625293 WDR33Q9C0J8 1336 aaKnown RBP23.39■■□□□ 1.33
TREX1-205ENST00000625293 ZPR1O75312 459 aa23.39■■□□□ 1.33
TREX1-205ENST00000625293 UBE3CQ15386 1083 aa23.39■■□□□ 1.33
TREX1-205ENST00000625293 SETDB2Q96T68 719 aa23.38■■□□□ 1.33
TREX1-205ENST00000625293 A0A0G2JLW4 131 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 HMGB1P09429 215 aaKnown RBP23.37■■□□□ 1.33
TREX1-205ENST00000625293 GYS1P13807 737 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 RASGRF1Q13972 1273 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 SPATA5Q8NB90 893 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 C4AP0C0L4 1744 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 ADRA2BP18089 450 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 ANKRD18AQ8IVF6 992 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 NECAB1Q8N987 351 aa23.37■■□□□ 1.33
TREX1-205ENST00000625293 BSDC1Q9NW68 430 aaPredicted RBP23.37■■□□□ 1.33
TREX1-205ENST00000625293 GOLGB1Q14789 3259 aaKnown RBP23.36■■□□□ 1.33
TREX1-205ENST00000625293 A0A1B0GUL6 1792 aa23.36■■□□□ 1.33
TREX1-205ENST00000625293 TCRBV5S4A2TA0A5A2 114 aa23.36■■□□□ 1.33
TREX1-205ENST00000625293 GPAA1O43292 621 aa23.36■■□□□ 1.33
TREX1-205ENST00000625293 KLHL40Q2TBA0 621 aa23.36■■□□□ 1.33
TREX1-205ENST00000625293 FOXD4L5Q5VV16 416 aaPredicted RBP23.36■■□□□ 1.33
TREX1-205ENST00000625293 FOXD4L4Q8WXT5 416 aaPredicted RBP23.36■■□□□ 1.33
TREX1-205ENST00000625293 E7EWF7 191 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 SYT1P21579 422 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 GJB2P29033 226 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 EXOSC10Q01780 885 aaKnown RBP23.35■■□□□ 1.33
TREX1-205ENST00000625293 SLC9C2Q5TAH2 1124 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 TTLL5Q6EMB2 1281 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 DHX32Q7L7V1 743 aaKnown RBP23.35■■□□□ 1.33
TREX1-205ENST00000625293 CHAMP1Q96JM3 812 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 GZF1Q9H116 711 aaPredicted RBP23.35■■□□□ 1.33
TREX1-205ENST00000625293 CTNNA3Q9UI47 895 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 DOCK2Q92608 1830 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 PDE6AP16499 860 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 POLD1P28340 1107 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 Q6ZUG5 572 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 NBPF5PQ86XG9 351 aaPredicted RBP23.35■■□□□ 1.33
TREX1-205ENST00000625293 AGXT2Q9BYV1 514 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 FHDC1Q9C0D6 1143 aaPredicted RBP23.35■■□□□ 1.33
TREX1-205ENST00000625293 WWC3Q9ULE0 1092 aa23.35■■□□□ 1.33
TREX1-205ENST00000625293 STX6O43752 255 aa23.34■■□□□ 1.33
TREX1-205ENST00000625293 KLHL34Q8N239 644 aa23.34■■□□□ 1.33
TREX1-205ENST00000625293 ZNF804BA4D1E1 1349 aa23.34■■□□□ 1.33
TREX1-205ENST00000625293 FSD2A1L4K1 749 aa23.33■■□□□ 1.33
TREX1-205ENST00000625293 IDH1O75874 414 aaKnown RBP23.33■■□□□ 1.33
TREX1-205ENST00000625293 FGAP02671 866 aa23.33■■□□□ 1.33
TREX1-205ENST00000625293 ZSCAN22P10073 491 aaPredicted RBP23.33■■□□□ 1.33
TREX1-205ENST00000625293 GTF2E1P29083 439 aaPredicted RBP23.33■■□□□ 1.33
TREX1-205ENST00000625293 BCAMP50895 628 aa23.33■■□□□ 1.33
TREX1-205ENST00000625293 CELF1Q92879 486 aaKnown RBP23.33■■□□□ 1.33
TREX1-205ENST00000625293 LAMA4Q16363 1823 aa23.33■■□□□ 1.33
TREX1-205ENST00000625293 ZNF532Q9HCE3 1301 aa23.33■■□□□ 1.32
TREX1-205ENST00000625293 TPTE2Q6XPS3 522 aa23.32■■□□□ 1.32
TREX1-205ENST00000625293 MINPP1Q9UNW1 487 aa23.32■■□□□ 1.32
TREX1-205ENST00000625293 MMP10P09238 476 aa23.32■■□□□ 1.32
TREX1-205ENST00000625293 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
TREX1-205ENST00000625293 NLRP3Q96P20 1036 aa23.32■■□□□ 1.32
TREX1-205ENST00000625293 GTF3C6Q969F1 213 aa23.31■■□□□ 1.32
TREX1-205ENST00000625293 MYO5AQ9Y4I1 1855 aaKnown RBP23.31■■□□□ 1.32
TREX1-205ENST00000625293 UTRNP46939 3433 aa23.31■■□□□ 1.32
TREX1-205ENST00000625293 PRPF40AO75400 957 aaKnown RBP23.3■■□□□ 1.32
TREX1-205ENST00000625293 IMMTQ16891 758 aaKnown RBP23.3■■□□□ 1.32
TREX1-205ENST00000625293 FBXL16Q8N461 479 aa23.3■■□□□ 1.32
TREX1-205ENST00000625293 MTMR6Q9Y217 621 aa23.3■■□□□ 1.32
TREX1-205ENST00000625293 DDX49Q9Y6V7 483 aaKnown RBP23.3■■□□□ 1.32
TREX1-205ENST00000625293 SYT17Q9BSW7 474 aa23.29■■□□□ 1.32
TREX1-205ENST00000625293 TM4SF1P30408 202 aa23.29■■□□□ 1.32
TREX1-205ENST00000625293 NLGN1Q8N2Q7 840 aa23.29■■□□□ 1.32
TREX1-205ENST00000625293 BRF1Q92994 677 aa23.29■■□□□ 1.32
TREX1-205ENST00000625293 CARMIL3Q8ND23 1372 aa23.29■■□□□ 1.32
TREX1-205ENST00000625293 TAF1P21675 1872 aa23.28■■□□□ 1.32
TREX1-205ENST00000625293 TNRC6CQ9HCJ0 1690 aaKnown RBP23.28■■□□□ 1.32
TREX1-205ENST00000625293 F13A1P00488 732 aa23.28■■□□□ 1.32
TREX1-205ENST00000625293 PDIA4P13667 645 aaKnown RBP23.28■■□□□ 1.32
TREX1-205ENST00000625293 RPS8P62241 208 aaKnown RBP23.28■■□□□ 1.32
TREX1-205ENST00000625293 MAP3K12Q12852 859 aa23.28■■□□□ 1.32
TREX1-205ENST00000625293 STRBPQ96SI9 672 aaKnown RBP23.28■■□□□ 1.32
TREX1-205ENST00000625293 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
TREX1-205ENST00000625293 NFIXQ14938 502 aa23.27■■□□□ 1.32
TREX1-205ENST00000625293 WTIPA6NIX2 430 aaPredicted RBP23.27■■□□□ 1.32
TREX1-205ENST00000625293 PFKFB2O60825 505 aa23.27■■□□□ 1.32
TREX1-205ENST00000625293 DTNBO60941 627 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms