RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 CCNJLQ8IV13 435 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 GLIS3Q8NEA6 775 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 PSMG3-AS1Q96PY0 264 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 SEMA6BQ9H3T3 888 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 LATS2Q9NRM7 1088 aa5.65□□□□□ -1.5
CDKL5-208ENST00000624953 TDRD9Q8NDG6 1382 aaKnown RBP5.65□□□□□ -1.51
CDKL5-208ENST00000624953 GAPVD1Q14C86 1478 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 EIF1AYO14602 144 aaKnown RBP5.64□□□□□ -1.51
CDKL5-208ENST00000624953 COL19A1Q14993 1142 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 PRPF40BQ6NWY9 871 aaKnown RBP5.64□□□□□ -1.51
CDKL5-208ENST00000624953 Q6ZS46 218 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 MAP4K3Q8IVH8 894 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 WNT8BQ93098 351 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 LENG1Q96BZ8 264 aaPredicted RBP5.64□□□□□ -1.51
CDKL5-208ENST00000624953 CSRNP1Q96S65 589 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 TSPOAP1O95153 1857 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 SYNJ2O15056 1496 aa5.64□□□□□ -1.51
CDKL5-208ENST00000624953 PDE2AO00408 941 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-208ENST00000624953 CPNE3O75131 537 aaKnown RBP5.63□□□□□ -1.51
CDKL5-208ENST00000624953 NEFLP07196 543 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 EPHA1P21709 976 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 AAMPQ13685 434 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 ADGRE1Q14246 886 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 VN1R5Q7Z5H4 357 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 NCAPG2Q86XI2 1143 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 WFDC8Q8IUA0 241 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 DMRTC2Q8IXT2 367 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-208ENST00000624953 CCDC74AQ96AQ1 378 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 OSMRQ99650 979 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 SSBP4Q9BWG4 385 aaPredicted RBP5.63□□□□□ -1.51
CDKL5-208ENST00000624953 NIF3L1Q9GZT8 377 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 MUC3BQ9H195 1237 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 RBSNQ9H1K0 784 aa5.63□□□□□ -1.51
CDKL5-208ENST00000624953 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 SMNDC1O75940 238 aaKnown RBP eCLIP5.62□□□□□ -1.51
CDKL5-208ENST00000624953 ITPKAP23677 461 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 FOXD4L6Q3SYB3 417 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-208ENST00000624953 CEP135Q66GS9 1140 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 FOXD4L3Q6VB84 417 aaPredicted RBP5.62□□□□□ -1.51
CDKL5-208ENST00000624953 IL22RA1Q8N6P7 574 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 GALNT11Q8NCW6 608 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 SPACA7Q96KW9 195 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 NRSN2Q9GZP1 204 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 SOGA1O94964 1423 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 ADAMTS12P58397 1594 aa5.62□□□□□ -1.51
CDKL5-208ENST00000624953 TRPA1O75762 1119 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 POLR3DP05423 398 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-208ENST00000624953 PTPRAP18433 802 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 MAPK1P28482 360 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 CDC27P30260 824 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 PTPN12Q05209 780 aaKnown RBP5.61□□□□□ -1.51
CDKL5-208ENST00000624953 GRIN2BQ13224 1484 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 PRRT3Q5FWE3 981 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 NPAS4Q8IUM7 802 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 TMEM130Q8N3G9 435 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 ANKRD24Q8TF21 1146 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-208ENST00000624953 ABCB6Q9NP58 842 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 BIN2Q9UBW5 565 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-208ENST00000624953 PPME1Q9Y570 386 aa5.61□□□□□ -1.51
CDKL5-208ENST00000624953 H3BRJ5 948 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 GATA4P43694 442 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 GRIA4P48058 902 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 RAC1P63000 192 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 TRIM28Q13263 835 aaKnown RBP5.6□□□□□ -1.51
CDKL5-208ENST00000624953 MBTPS1Q14703 1052 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 RSPO4Q2I0M5 234 aaPredicted RBP5.6□□□□□ -1.51
CDKL5-208ENST00000624953 ZMYM1Q5SVZ6 1142 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 TRAPPC3LQ5T215 181 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 TTC16Q8NEE8 873 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 FBF1Q8TES7 1133 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 BSNDQ8WZ55 320 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 NPHS2Q9NP85 383 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 OSGEPQ9NPF4 335 aa5.6□□□□□ -1.51
CDKL5-208ENST00000624953 PPRC1Q5VV67 1664 aaKnown RBP5.59□□□□□ -1.51
CDKL5-208ENST00000624953 DIP2BQ9P265 1576 aa5.59□□□□□ -1.51
CDKL5-208ENST00000624953 C9orf172C9J069 976 aa5.59□□□□□ -1.51
CDKL5-208ENST00000624953 ADAM11O75078 769 aa5.59□□□□□ -1.51
CDKL5-208ENST00000624953 PIP4K2BP78356 416 aa5.59□□□□□ -1.51
CDKL5-208ENST00000624953 GRIK4Q16099 956 aa5.59□□□□□ -1.51
CDKL5-208ENST00000624953 GDF6Q6KF10 455 aaPredicted RBP5.59□□□□□ -1.51
CDKL5-208ENST00000624953 IGF2-ASQ6U949 168 aa5.59□□□□□ -1.51
CDKL5-208ENST00000624953 NACC1Q96RE7 527 aa5.59□□□□□ -1.51
CDKL5-208ENST00000624953 SH2B1Q9NRF2 756 aaPredicted RBP5.59□□□□□ -1.51
CDKL5-208ENST00000624953 P4HBP07237 508 aaKnown RBP5.58□□□□□ -1.52
CDKL5-208ENST00000624953 ESRRAP11474 423 aaPredicted RBP5.58□□□□□ -1.52
CDKL5-208ENST00000624953 PLCB3Q01970 1234 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 GRM2Q14416 872 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 SHISA2Q6UWI4 295 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 FBXO33Q7Z6M2 555 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 AEBP1Q8IUX7 1158 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 ZSCAN29Q8IWY8 852 aaPredicted RBP5.58□□□□□ -1.52
CDKL5-208ENST00000624953 KLHL23Q8NBE8 558 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 FOXD4L4Q8WXT5 416 aaPredicted RBP5.58□□□□□ -1.52
CDKL5-208ENST00000624953 ZNF576Q9H609 170 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 TPSG1Q9NRR2 321 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 ADCY10Q96PN6 1610 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 ABCA10Q8WWZ4 1543 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms