RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 CACNA1FO60840 1977 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 SOX1O00570 391 aaPredicted RBP9.43□□□□□ -0.9
LINC00963-218ENST00000624138 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
LINC00963-218ENST00000624138 PRMT2P55345 433 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 DLGAP5Q15398 846 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 TAF1CQ15572 869 aaPredicted RBP9.43□□□□□ -0.9
LINC00963-218ENST00000624138 HDGFL1Q5TGJ6 251 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 BRI3BPQ8WY22 251 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 OPTNQ96CV9 577 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 CCDC85AQ96PX6 553 aaPredicted RBP9.43□□□□□ -0.9
LINC00963-218ENST00000624138 CDC5LQ99459 802 aaKnown RBP9.43□□□□□ -0.9
LINC00963-218ENST00000624138 HTATIP2Q9BUP3 242 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 UNC80Q8N2C7 3258 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 AK9Q5TCS8 1911 aa9.43□□□□□ -0.9
LINC00963-218ENST00000624138 MYCP01106 439 aaPredicted RBP9.42□□□□□ -0.9
LINC00963-218ENST00000624138 GJA8P48165 433 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 GTF2IP78347 998 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 LACTBP83111 547 aaPredicted RBP9.42□□□□□ -0.9
LINC00963-218ENST00000624138 MTFR1Q15390 333 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 GPR153Q6NV75 609 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 RIC3Q7Z5B4 369 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 NKX2-3Q8TAU0 364 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 LRCH3Q96II8 777 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 ELP3Q9H9T3 547 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 PCDHAC2Q9Y5I4 1007 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 NR2E3Q9Y5X4 410 aa9.42□□□□□ -0.9
LINC00963-218ENST00000624138 CCL15-CCL14A0A0B4J2E2 113 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 TLR2O60603 784 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 GJB1P08034 283 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
LINC00963-218ENST00000624138 GTF2A2P52657 109 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 LMOD3Q0VAK6 560 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 CCL15Q16663 113 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-218ENST00000624138 FAM43AQ8N2R8 423 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 CERS5Q8N5B7 392 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 TTLL11Q8NHH1 800 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-218ENST00000624138 PRMT6Q96LA8 375 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-218ENST00000624138 MYD88Q99836 296 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 ARHGAP39Q9C0H5 1083 aa9.41□□□□□ -0.9
LINC00963-218ENST00000624138 ZCCHC17Q9NP64 241 aaKnown RBP9.41□□□□□ -0.9
LINC00963-218ENST00000624138 SPDYE2BA6NHP3 402 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 MYO1BO43795 1136 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 SPDYE6P0CI01 402 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 KLRK1P26718 216 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 CTSWP56202 376 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 RASA3Q14644 834 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 KIF22Q14807 665 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 CFAP100Q494V2 611 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 PHAXQ9H814 394 aaKnown RBP9.4□□□□□ -0.9
LINC00963-218ENST00000624138 CD209Q9NNX6 404 aa9.4□□□□□ -0.9
LINC00963-218ENST00000624138 CWC25Q9NXE8 425 aaPredicted RBP9.4□□□□□ -0.9
LINC00963-218ENST00000624138 AOX1Q06278 1338 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 IRS2Q9Y4H2 1338 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 CLRN2A0PK11 232 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 CTGFP29279 349 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 FKBP1AP62942 108 aaKnown RBP9.39□□□□□ -0.91
LINC00963-218ENST00000624138 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 CNKSR2Q8WXI2 1034 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 TEPSINQ96N21 525 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 ANKRD2Q9GZV1 360 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 GREM2Q9H772 168 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 SRRDQ9UH36 339 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 PTPRFP10586 1907 aa9.39□□□□□ -0.91
LINC00963-218ENST00000624138 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
LINC00963-218ENST00000624138 CCL5P13501 91 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 CAPN2P17655 700 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 GRK4P32298 578 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 BMP8BP34820 402 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 MAP3K9P80192 1104 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 DUSP27Q5VZP5 1158 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 C17orf99Q6UX52 265 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 C15orf52Q6ZUT6 534 aaKnown RBP9.38□□□□□ -0.91
LINC00963-218ENST00000624138 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
LINC00963-218ENST00000624138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC00963-218ENST00000624138 METTL22Q9BUU2 404 aaPredicted RBP9.38□□□□□ -0.91
LINC00963-218ENST00000624138 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
LINC00963-218ENST00000624138 VEZTQ9HBM0 779 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 STXBP5LQ9Y2K9 1186 aa9.38□□□□□ -0.91
LINC00963-218ENST00000624138 BTBD19C9JJ37 291 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 IL1R1P14778 569 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 HOXD10P28358 340 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 TNFAIP1Q13829 316 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 VGLL4Q14135 290 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 SPDYE2Q495Y8 402 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 STAP2Q9UGK3 403 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
LINC00963-218ENST00000624138 LAS1LQ9Y4W2 734 aaKnown RBP9.37□□□□□ -0.91
LINC00963-218ENST00000624138 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
LINC00963-218ENST00000624138 F8W031 263 aaPredicted RBP9.36□□□□□ -0.91
LINC00963-218ENST00000624138 EVI5O60447 810 aa9.36□□□□□ -0.91
LINC00963-218ENST00000624138 FARP2O94887 1054 aaPredicted RBP9.36□□□□□ -0.91
LINC00963-218ENST00000624138 SGPL1O95470 568 aa9.36□□□□□ -0.91
LINC00963-218ENST00000624138 CETPP11597 493 aa9.36□□□□□ -0.91
LINC00963-218ENST00000624138 OSBPP22059 807 aa9.36□□□□□ -0.91
LINC00963-218ENST00000624138 IGHMBP2P38935 993 aaKnown RBP9.36□□□□□ -0.91
LINC00963-218ENST00000624138 PSMC4P43686 418 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms