RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 HLFQ16534 295 aa12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 CSADQ9Y600 493 aa12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 F8W031 263 aaPredicted RBP12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 GYS1P13807 737 aa12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 APPBP2Q92624 585 aa12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 HOOK1Q9UJC3 728 aaKnown RBP12.86□□□□□ -0.35
PCDH11Y-207ENST00000622698 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 GTF2IP78347 998 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 TMOD4Q9NZQ9 345 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 DISP2A7MBM2 1401 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 SLKQ9H2G2 1235 aaPredicted RBP12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 TTF2Q9UNY4 1162 aaKnown RBP12.85□□□□□ -0.35
PCDH11Y-207ENST00000622698 KAT14Q9H8E8 782 aa12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 NWD2Q9ULI1 1742 aa12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 GOLGA6L6A8MZA4 724 aa12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 MAGEB6Q8N7X4 407 aa12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 NOL7Q9UMY1 257 aaKnown RBP12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 RPAP1Q9BWH6 1393 aaPredicted RBP12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 PRPF40BQ6NWY9 871 aaKnown RBP12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
PCDH11Y-207ENST00000622698 APOBEC3FQ8IUX4 373 aaKnown RBP12.83□□□□□ -0.35
PCDH11Y-207ENST00000622698 C21orf2O43822 256 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 EAPPQ56P03 285 aaPredicted RBP12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 LTN1O94822 1766 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 CCDC96Q2M329 555 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 ARPP21Q9UBL0 812 aaPredicted RBP12.83□□□□□ -0.36
PCDH11Y-207ENST00000622698 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 ALS2Q96Q42 1657 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 RGPD8O14715 1765 aaPredicted RBP12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 LMNB1P20700 586 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 ZNF594Q96JF6 807 aaPredicted RBP12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 NTSR2O95665 410 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 NUCB2P80303 420 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 TAF5LO75529 589 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 COL22A1Q8NFW1 1626 aaPredicted RBP12.82□□□□□ -0.36
PCDH11Y-207ENST00000622698 PNMA8AQ86V59 439 aaPredicted RBP12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 MCM5P33992 734 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 IQSEC3Q9UPP2 1182 aaPredicted RBP12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 SLC12A7Q9Y666 1083 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 NRDCO43847 1150 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 ANAPC15P60006 121 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 CAMKK2Q96RR4 588 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 GLT8D2Q9H1C3 349 aa12.81□□□□□ -0.36
PCDH11Y-207ENST00000622698 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 TPM4P67936 248 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 PICALMQ13492 652 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 SWAP70Q9UH65 585 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 CCDC171Q6TFL3 1326 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 RLBP1P12271 317 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 UBE3CQ15386 1083 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 TIMM10P62072 90 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 NUP133Q8WUM0 1156 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 USP40Q9NVE5 1235 aa12.8□□□□□ -0.36
PCDH11Y-207ENST00000622698 IGKV5-2P06315 115 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 PPP2R5BQ15173 497 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 TXLNAP40222 546 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 HMGN5P82970 282 aaKnown RBP12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 JAKMIP1Q96N16 626 aaKnown RBP12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 DPEP1P16444 411 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 KIF22Q14807 665 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 RABL6Q3YEC7 729 aaPredicted RBP12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 TRPM3Q9HCF6 1732 aaPredicted RBP12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 ATP8A2Q9NTI2 1148 aa12.79□□□□□ -0.36
PCDH11Y-207ENST00000622698 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms