RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 RTN1Q16799 776 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 CCDC70Q6NSX1 233 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 CATIPQ7Z7H3 387 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 APPBP2Q92624 585 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 IFNKQ9P0W0 207 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 EPHA10Q5JZY3 1008 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 LLPHQ9BRT6 129 aaKnown RBP14.81□□□□□ -0.04
MSH6-215ENST00000622629 ERBB3P21860 1342 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 NECTIN1Q15223 517 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
MSH6-215ENST00000622629 USP5P45974 858 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 CDK5RAP3Q96JB5 506 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 HAUS7Q99871 368 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 MYL10Q9BUA6 226 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
MSH6-215ENST00000622629 ZNF500O60304 480 aaPredicted RBP14.8□□□□□ -0.04
MSH6-215ENST00000622629 IGKV5-2P06315 115 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 NLRP5P59047 1200 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 USP28Q96RU2 1077 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 CDC5LQ99459 802 aaKnown RBP14.8□□□□□ -0.04
MSH6-215ENST00000622629 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
MSH6-215ENST00000622629 RIMS1Q86UR5 1692 aaKnown RBP14.8□□□□□ -0.04
MSH6-215ENST00000622629 HSPD1P10809 573 aaKnown RBP14.8□□□□□ -0.04
MSH6-215ENST00000622629 AFMP43652 599 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 ARHGAP29Q52LW3 1261 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 HSP90B2PQ58FF3 399 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 CAGE1Q8TC20 777 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 PAXIP1Q6ZW49 1069 aaPredicted RBP14.8□□□□□ -0.04
MSH6-215ENST00000622629 DZIP1Q86YF9 867 aaKnown RBP14.8□□□□□ -0.04
MSH6-215ENST00000622629 IL25Q9H293 177 aa14.8□□□□□ -0.04
MSH6-215ENST00000622629 MBD4O95243 580 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 PTPN12Q05209 780 aaKnown RBP14.79□□□□□ -0.04
MSH6-215ENST00000622629 CCDC152Q4G0S7 254 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 CD163L1Q9NR16 1453 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 DEPDC5O75140 1603 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 ZSCAN12O43309 604 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 ATP6V1AP38606 617 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 STIM1Q13586 685 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 PHKBQ93100 1093 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 PAXBP1Q9Y5B6 917 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 CYP2E1P05181 493 aaPredicted RBP14.79□□□□□ -0.04
MSH6-215ENST00000622629 LRMPQ12912 555 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 IKQ13123 557 aaPredicted RBP14.79□□□□□ -0.04
MSH6-215ENST00000622629 SOGA3Q5TF21 947 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 KRT23Q9C075 422 aa14.79□□□□□ -0.04
MSH6-215ENST00000622629 ZNF75DP51815 510 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 SLFNL1Q499Z3 407 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 CLEC17AQ6ZS10 378 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 BRAPQ7Z569 592 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 SCRN1Q12765 414 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 DSCC1Q9BVC3 393 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 ANKIB1Q9P2G1 1089 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 COL3A1P02461 1466 aaPredicted RBP14.78□□□□□ -0.04
MSH6-215ENST00000622629 DNAI1Q9UI46 699 aa14.78□□□□□ -0.04
MSH6-215ENST00000622629 ANGEL1Q9UNK9 670 aaKnown RBP14.78□□□□□ -0.04
MSH6-215ENST00000622629 NAA16Q6N069 864 aaPredicted RBP14.77□□□□□ -0.04
MSH6-215ENST00000622629 CCDC150Q8NCX0 1101 aa14.77□□□□□ -0.04
MSH6-215ENST00000622629 ZNHIT6Q9NWK9 470 aaKnown RBP14.77□□□□□ -0.04
MSH6-215ENST00000622629 MYOM1P52179 1685 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 SSBP05455 408 aaKnown RBP eCLIP14.77□□□□□ -0.05
MSH6-215ENST00000622629 TCIRG1Q13488 830 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 BRINP3Q76B58 766 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 ESR2Q92731 530 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 FTOQ9C0B1 505 aaKnown RBP eCLIP14.77□□□□□ -0.05
MSH6-215ENST00000622629 CNNM2Q9H8M5 875 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 A0A087WWV3 80 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 RIOK3O14730 519 aaKnown RBP14.77□□□□□ -0.05
MSH6-215ENST00000622629 ZPR1O75312 459 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 ANO1Q5XXA6 986 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 ZSWIM4Q9H7M6 989 aa14.77□□□□□ -0.05
MSH6-215ENST00000622629 SPECC1Q5M775 1068 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 ZHX3Q9H4I2 956 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 OVOS2A0A0J9YW53 1432 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 OVOS2Q6IE36 1432 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 ADORA1P30542 326 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 GNG11P61952 73 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 MTX1Q13505 466 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 TMCO3Q6UWJ1 677 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 ARMT1Q9H993 441 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 DDIT3P35638 169 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 EIF5P55010 431 aaKnown RBP14.76□□□□□ -0.05
MSH6-215ENST00000622629 ATL3Q6DD88 541 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 CGNQ9P2M7 1197 aaKnown RBP14.76□□□□□ -0.05
MSH6-215ENST00000622629 MROH1Q8NDA8 1641 aa14.76□□□□□ -0.05
MSH6-215ENST00000622629 FGAP02671 866 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 UTP14AQ9BVJ6 771 aaKnown RBP14.75□□□□□ -0.05
MSH6-215ENST00000622629 ERICH4A6NGS2 130 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 IFIT1BQ5T764 474 aaKnown RBP14.75□□□□□ -0.05
MSH6-215ENST00000622629 ANKRD18AQ8IVF6 992 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 DHX58Q96C10 678 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 TTC14Q96N46 770 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 PPLO60437 1756 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 ADCY9O60503 1353 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 PFKFB2O60825 505 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 ADD1P35611 737 aaKnown RBP14.75□□□□□ -0.05
MSH6-215ENST00000622629 KIF4BQ2VIQ3 1234 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms