RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
SIRPA-204ENST00000622179 MAP2P11137 1827 aaKnown RBP15.31■□□□□ 0.04
SIRPA-204ENST00000622179 LMOD1P29536 600 aaPredicted RBP15.31■□□□□ 0.04
SIRPA-204ENST00000622179 NAP1L1P55209 391 aaKnown RBP15.31■□□□□ 0.04
SIRPA-204ENST00000622179 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
SIRPA-204ENST00000622179 CPLX3Q8WVH0 158 aa15.31■□□□□ 0.04
SIRPA-204ENST00000622179 ESR2Q92731 530 aa15.31■□□□□ 0.04
SIRPA-204ENST00000622179 SMARCE1Q969G3 411 aa15.31■□□□□ 0.04
SIRPA-204ENST00000622179 PDCL2Q8N4E4 241 aa15.31■□□□□ 0.04
SIRPA-204ENST00000622179 AGLP35573 1532 aa15.3■□□□□ 0.04
SIRPA-204ENST00000622179 SLFNL1Q499Z3 407 aa15.3■□□□□ 0.04
SIRPA-204ENST00000622179 ADCY9O60503 1353 aa15.3■□□□□ 0.04
SIRPA-204ENST00000622179 RBM5P52756 815 aaKnown RBP eCLIP15.3■□□□□ 0.04
SIRPA-204ENST00000622179 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
SIRPA-204ENST00000622179 SETDB2Q96T68 719 aa15.3■□□□□ 0.04
SIRPA-204ENST00000622179 LLPHQ9BRT6 129 aaKnown RBP15.3■□□□□ 0.04
SIRPA-204ENST00000622179 DSCC1Q9BVC3 393 aa15.3■□□□□ 0.04
SIRPA-204ENST00000622179 ZDHHC9Q9Y397 364 aa15.3■□□□□ 0.04
SIRPA-204ENST00000622179 SKILP12757 684 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 PDE4CQ08493 712 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 NECTIN1Q15223 517 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 PUM3Q15397 648 aaKnown RBP15.29■□□□□ 0.04
SIRPA-204ENST00000622179 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
SIRPA-204ENST00000622179 NOC3LQ8WTT2 800 aaKnown RBP15.29■□□□□ 0.04
SIRPA-204ENST00000622179 PHKBQ93100 1093 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 C8orf37Q96NL8 207 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
SIRPA-204ENST00000622179 CCDC24Q8N4L8 307 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 KIF18AQ8NI77 898 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 STX8Q9UNK0 236 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 ZNF532Q9HCE3 1301 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 MAGEB6P1A0A0J9YX57 407 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 SSBP05455 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
SIRPA-204ENST00000622179 MTX1Q13505 466 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 TMX1Q9H3N1 280 aa15.29■□□□□ 0.04
SIRPA-204ENST00000622179 ANGEL1Q9UNK9 670 aaKnown RBP15.29■□□□□ 0.04
SIRPA-204ENST00000622179 AFMP43652 599 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 PI16Q6UXB8 463 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 PPP1R9BQ96SB3 815 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 VAT1LQ9HCJ6 419 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 FAM160A1Q05DH4 1040 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 STIM1Q13586 685 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 GREM2Q9H772 168 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 CBX8Q9HC52 389 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 C6orf229H3BNL8 230 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 FGAP02671 866 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 RFC4P35249 363 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 CTDSPL2Q05D32 466 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 RPGRQ92834 1020 aaKnown RBP15.28■□□□□ 0.04
SIRPA-204ENST00000622179 CLSTN2Q9H4D0 955 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
SIRPA-204ENST00000622179 NR1I2O75469 434 aa15.27■□□□□ 0.04
SIRPA-204ENST00000622179 PDE4BQ07343 736 aa15.27■□□□□ 0.04
SIRPA-204ENST00000622179 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
SIRPA-204ENST00000622179 NRKQ7Z2Y5 1582 aa15.27■□□□□ 0.04
SIRPA-204ENST00000622179 CCDC194A0A1B0GVG4 234 aa15.27■□□□□ 0.03
SIRPA-204ENST00000622179 PRDM1O75626 825 aa15.27■□□□□ 0.03
SIRPA-204ENST00000622179 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.03
SIRPA-204ENST00000622179 CRNKL1Q9BZJ0 848 aaKnown RBP15.27■□□□□ 0.03
SIRPA-204ENST00000622179 IL25Q9H293 177 aa15.27■□□□□ 0.03
SIRPA-204ENST00000622179 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.03
SIRPA-204ENST00000622179 UBASH3AP57075 661 aa15.27■□□□□ 0.03
SIRPA-204ENST00000622179 SCRN1Q12765 414 aa15.27■□□□□ 0.03
SIRPA-204ENST00000622179 BRAPQ7Z569 592 aa15.27■□□□□ 0.03
SIRPA-204ENST00000622179 NEMFO60524 1076 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 GSDMDP57764 484 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 LPIN2Q92539 896 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 URI1O94763 535 aaPredicted RBP15.26■□□□□ 0.03
SIRPA-204ENST00000622179 CTSWP56202 376 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 GPS2Q13227 327 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
SIRPA-204ENST00000622179 USP28Q96RU2 1077 aa15.26■□□□□ 0.03
SIRPA-204ENST00000622179 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
SIRPA-204ENST00000622179 TECPR2O15040 1411 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
SIRPA-204ENST00000622179 KRT18P05783 430 aaKnown RBP15.25■□□□□ 0.03
SIRPA-204ENST00000622179 CBX1P83916 185 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 CARD10Q9BWT7 1032 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 PRIMPOLQ96LW4 560 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 AK7Q96M32 723 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 ZBTB1Q9Y2K1 713 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 DYNC1I1O14576 645 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
SIRPA-204ENST00000622179 EPS15P42566 896 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 CCDC70Q6NSX1 233 aa15.25■□□□□ 0.03
SIRPA-204ENST00000622179 GNAT2P19087 354 aa15.24■□□□□ 0.03
SIRPA-204ENST00000622179 ANO1Q5XXA6 986 aa15.24■□□□□ 0.03
SIRPA-204ENST00000622179 PDCL3Q9H2J4 239 aa15.24■□□□□ 0.03
SIRPA-204ENST00000622179 ZNF287Q9HBT7 754 aa15.24■□□□□ 0.03
SIRPA-204ENST00000622179 CCDC87Q9NVE4 849 aa15.24■□□□□ 0.03
SIRPA-204ENST00000622179 IFNKQ9P0W0 207 aa15.24■□□□□ 0.03
SIRPA-204ENST00000622179 SEC63Q9UGP8 760 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms