RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PTPN12Q05209 780 aaKnown RBP20.72■□□□□ 0.91
FAM3A-222ENST00000621967 TSGA10IPQ3SY00 556 aa20.72■□□□□ 0.91
FAM3A-222ENST00000621967 CRY2Q49AN0 593 aa20.72■□□□□ 0.91
FAM3A-222ENST00000621967 DDX46Q7L014 1031 aaKnown RBP20.72■□□□□ 0.91
FAM3A-222ENST00000621967 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.72■□□□□ 0.91
FAM3A-222ENST00000621967 ATP5JP18859 108 aa20.72■□□□□ 0.91
FAM3A-222ENST00000621967 RNF20Q5VTR2 975 aa20.72■□□□□ 0.91
FAM3A-222ENST00000621967 PPP1R1BQ9UD71 204 aaPredicted RBP20.72■□□□□ 0.91
FAM3A-222ENST00000621967 KLRG2A4D1S0 409 aaPredicted RBP20.71■□□□□ 0.91
FAM3A-222ENST00000621967 PDIA4P13667 645 aaKnown RBP20.71■□□□□ 0.91
FAM3A-222ENST00000621967 KCNJ4P48050 445 aa20.71■□□□□ 0.91
FAM3A-222ENST00000621967 FAM184AQ8NB25 1140 aa20.71■□□□□ 0.91
FAM3A-222ENST00000621967 CDC5LQ99459 802 aaKnown RBP20.71■□□□□ 0.91
FAM3A-222ENST00000621967 SEC31BQ9NQW1 1179 aa20.71■□□□□ 0.91
FAM3A-222ENST00000621967 HMG20BQ9P0W2 317 aa20.71■□□□□ 0.91
FAM3A-222ENST00000621967 TPCN1Q9ULQ1 816 aa20.71■□□□□ 0.91
FAM3A-222ENST00000621967 ZNF500O60304 480 aaPredicted RBP20.7■□□□□ 0.91
FAM3A-222ENST00000621967 LETM1O95202 739 aaPredicted RBP20.7■□□□□ 0.91
FAM3A-222ENST00000621967 TNNI3KQ59H18 835 aa20.7■□□□□ 0.91
FAM3A-222ENST00000621967 C2CD5Q86YS7 1000 aa20.7■□□□□ 0.91
FAM3A-222ENST00000621967 RNF214Q8ND24 703 aa20.7■□□□□ 0.91
FAM3A-222ENST00000621967 DBNLQ9UJU6 430 aaKnown RBP20.7■□□□□ 0.91
FAM3A-222ENST00000621967 FPGT-TNNI3KV9GXZ4 949 aa20.7■□□□□ 0.91
FAM3A-222ENST00000621967 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
FAM3A-222ENST00000621967 H0YIN7 160 aa20.7■□□□□ 0.9
FAM3A-222ENST00000621967 OFD1O75665 1012 aa20.7■□□□□ 0.9
FAM3A-222ENST00000621967 MCM5P33992 734 aa20.7■□□□□ 0.9
FAM3A-222ENST00000621967 CSPP1Q1MSJ5 1256 aa20.7■□□□□ 0.9
FAM3A-222ENST00000621967 RBM17Q96I25 401 aaKnown RBP20.7■□□□□ 0.9
FAM3A-222ENST00000621967 ZNF594Q96JF6 807 aaPredicted RBP20.7■□□□□ 0.9
FAM3A-222ENST00000621967 ZKSCAN5Q9Y2L8 839 aa20.7■□□□□ 0.9
FAM3A-222ENST00000621967 ANKRD1Q15327 319 aa20.69■□□□□ 0.9
FAM3A-222ENST00000621967 UVSSAQ2YD98 709 aa20.69■□□□□ 0.9
FAM3A-222ENST00000621967 ZNF589Q86UQ0 364 aaPredicted RBP20.69■□□□□ 0.9
FAM3A-222ENST00000621967 CCDC39Q9UFE4 941 aa20.69■□□□□ 0.9
FAM3A-222ENST00000621967 KIF13BQ9NQT8 1826 aa20.69■□□□□ 0.9
FAM3A-222ENST00000621967 SRGNP10124 158 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 NPR1P16066 1061 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 RPS6KB1P23443 525 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 IGHMBP2P38935 993 aaKnown RBP20.68■□□□□ 0.9
FAM3A-222ENST00000621967 COL9A3Q14050 684 aaPredicted RBP20.68■□□□□ 0.9
FAM3A-222ENST00000621967 BLOC1S2Q6QNY1 142 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 MYH15Q9Y2K3 1946 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 TAF5LO75529 589 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 ANKRD18AQ8IVF6 992 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 MASTLQ96GX5 879 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 MPHOSPH8Q99549 860 aa20.68■□□□□ 0.9
FAM3A-222ENST00000621967 FIBPO43427 364 aa20.67■□□□□ 0.9
FAM3A-222ENST00000621967 TFCP2Q12800 502 aa20.67■□□□□ 0.9
FAM3A-222ENST00000621967 NECAB1Q8N987 351 aa20.67■□□□□ 0.9
FAM3A-222ENST00000621967 CHRNA5P30532 468 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 HOXA10P31260 410 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 DNM1Q05193 864 aaKnown RBP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 GRAPQ13588 217 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 TOB2Q14106 344 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 LDHAL6AQ6ZMR3 332 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 GRAPLQ8TC17 118 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 CELF1Q92879 486 aaKnown RBP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 ZNF622Q969S3 477 aaKnown RBP eCLIP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 TAF6LQ9Y6J9 622 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 SPEF2Q9C093 1822 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 TAF1P21675 1872 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 ZNF609O15014 1411 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
FAM3A-222ENST00000621967 CNNM1Q9NRU3 951 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 CD2APQ9Y5K6 639 aa20.66■□□□□ 0.9
FAM3A-222ENST00000621967 RPS8P62241 208 aaKnown RBP20.65■□□□□ 0.9
FAM3A-222ENST00000621967 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
FAM3A-222ENST00000621967 LRP5O75197 1615 aa20.65■□□□□ 0.9
FAM3A-222ENST00000621967 EYA2O00167 538 aa20.65■□□□□ 0.9
FAM3A-222ENST00000621967 ALDH1B1P30837 517 aa20.65■□□□□ 0.9
FAM3A-222ENST00000621967 TGFB2P61812 414 aa20.65■□□□□ 0.9
FAM3A-222ENST00000621967 STYK1Q6J9G0 422 aa20.65■□□□□ 0.9
FAM3A-222ENST00000621967 FUCA2Q9BTY2 467 aa20.65■□□□□ 0.9
FAM3A-222ENST00000621967 COL4A1P02462 1669 aa20.64■□□□□ 0.89
FAM3A-222ENST00000621967 VPS37CA5D8V6 355 aaPredicted RBP20.64■□□□□ 0.89
FAM3A-222ENST00000621967 PDCP20941 246 aa20.64■□□□□ 0.89
FAM3A-222ENST00000621967 KRT32Q14532 448 aa20.64■□□□□ 0.89
FAM3A-222ENST00000621967 HAUS7Q99871 368 aa20.64■□□□□ 0.89
FAM3A-222ENST00000621967 FBXO3Q9UK99 471 aa20.64■□□□□ 0.89
FAM3A-222ENST00000621967 TPM2P07951 284 aa20.63■□□□□ 0.89
FAM3A-222ENST00000621967 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
FAM3A-222ENST00000621967 LARP1BQ659C4 914 aaKnown RBP20.63■□□□□ 0.89
FAM3A-222ENST00000621967 PUS3Q9BZE2 481 aaKnown RBP20.63■□□□□ 0.89
FAM3A-222ENST00000621967 A0A0G2JLW4 131 aa20.63■□□□□ 0.89
FAM3A-222ENST00000621967 CIAO1O76071 339 aa20.63■□□□□ 0.89
FAM3A-222ENST00000621967 DPEP1P16444 411 aa20.63■□□□□ 0.89
FAM3A-222ENST00000621967 IL15P40933 162 aaPredicted RBP20.63■□□□□ 0.89
FAM3A-222ENST00000621967 TERF1P54274 439 aa20.63■□□□□ 0.89
FAM3A-222ENST00000621967 DBNDD2Q9BQY9 259 aa20.63■□□□□ 0.89
FAM3A-222ENST00000621967 ELP1O95163 1332 aa20.62■□□□□ 0.89
FAM3A-222ENST00000621967 DLEC1Q9Y238 1755 aa20.62■□□□□ 0.89
FAM3A-222ENST00000621967 SRCAPQ6ZRS2 3230 aa20.62■□□□□ 0.89
FAM3A-222ENST00000621967 CNKSR1Q969H4 720 aa20.62■□□□□ 0.89
FAM3A-222ENST00000621967 BSDC1Q9NW68 430 aaPredicted RBP20.62■□□□□ 0.89
FAM3A-222ENST00000621967 DTNBO60941 627 aa20.61■□□□□ 0.89
FAM3A-222ENST00000621967 BBOX1O75936 387 aa20.61■□□□□ 0.89
FAM3A-222ENST00000621967 CDC37L1Q7L3B6 337 aa20.61■□□□□ 0.89
FAM3A-222ENST00000621967 TCEANC2Q96MN5 208 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms