RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 TRMT1Q9NXH9 659 aaKnown RBP12.45□□□□□ -0.42
CDH1-214ENST00000621016 SUFUQ9UMX1 484 aa12.45□□□□□ -0.42
CDH1-214ENST00000621016 PDE6BP35913 854 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
CDH1-214ENST00000621016 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 ZCCHC17Q9NP64 241 aaKnown RBP12.44□□□□□ -0.42
CDH1-214ENST00000621016 SH3BP1Q9Y3L3 701 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
CDH1-214ENST00000621016 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
CDH1-214ENST00000621016 USP28Q96RU2 1077 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 FUCA2Q9BTY2 467 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 CWC25Q9NXE8 425 aaPredicted RBP12.44□□□□□ -0.42
CDH1-214ENST00000621016 RGPD2P0DJD1 1756 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 ZNF609O15014 1411 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 ARHGAP23Q9P227 1491 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 A0A1B0GVL5 298 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 KRT32Q14532 448 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 CCDC82Q8N4S0 544 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 KBTBD3Q8NAB2 608 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
CDH1-214ENST00000621016 CEP126Q9P2H0 1117 aa12.44□□□□□ -0.42
CDH1-214ENST00000621016 GUCY2CP25092 1073 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 EVA1CP58658 441 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 ZRSR1Q15695 479 aaKnown RBP12.43□□□□□ -0.42
CDH1-214ENST00000621016 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 PLCD4Q9BRC7 762 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 CLIP2Q9UDT6 1046 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 HSPD1P10809 573 aaKnown RBP12.43□□□□□ -0.42
CDH1-214ENST00000621016 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 TTC39AQ5SRH9 613 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 CCDC73Q6ZRK6 1079 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
CDH1-214ENST00000621016 HAUS7Q99871 368 aa12.43□□□□□ -0.42
CDH1-214ENST00000621016 E7EWF7 191 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 CPLX1O14810 134 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 ST5P78524 1137 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 FSIP1Q8NA03 581 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 CXorf56Q9H5V9 222 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 SNAP23O00161 211 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
CDH1-214ENST00000621016 ELF2Q15723 593 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 HSP90AA4PQ58FG1 418 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 C11orf57Q6ZUT1 292 aaPredicted RBP12.42□□□□□ -0.42
CDH1-214ENST00000621016 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
CDH1-214ENST00000621016 SLIT1O75093 1534 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 M0R2C6 588 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 IDH1O75874 414 aaKnown RBP12.42□□□□□ -0.42
CDH1-214ENST00000621016 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
CDH1-214ENST00000621016 SCARF1Q14162 830 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 CCDC112Q8NEF3 446 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 PIK3R5Q8WYR1 880 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 OSBP2Q969R2 916 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
CDH1-214ENST00000621016 MED23Q9ULK4 1368 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 CYP2C19P33261 490 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 RBM6P78332 1123 aaKnown RBP12.41□□□□□ -0.42
CDH1-214ENST00000621016 TPD52L1Q16890 204 aaPredicted RBP12.41□□□□□ -0.42
CDH1-214ENST00000621016 CFAP45Q9UL16 551 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
CDH1-214ENST00000621016 MARCKSP29966 332 aaPredicted RBP12.41□□□□□ -0.42
CDH1-214ENST00000621016 SATB1Q01826 763 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 FBXO38Q6PIJ6 1188 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
CDH1-214ENST00000621016 INCENPQ9NQS7 918 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 ADGRL3Q9HAR2 1447 aa12.41□□□□□ -0.42
CDH1-214ENST00000621016 ATP2B1P20020 1258 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 FOXO4P98177 505 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 RESTQ13127 1097 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 KIAA1524Q8TCG1 905 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 KCNB2Q92953 911 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 GOLPH3LQ9H4A5 285 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 CLSTN2Q9H4D0 955 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 UTYO14607 1347 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 CTDNEP1O95476 244 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 GNL2Q13823 731 aaKnown RBP12.4□□□□□ -0.42
CDH1-214ENST00000621016 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
CDH1-214ENST00000621016 AIFM3Q96NN9 605 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
CDH1-214ENST00000621016 LTN1O94822 1766 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 MAST3O60307 1309 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 KLF18A0A0U1RQI7 1052 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 GOLGA8BA8MQT2 603 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 ZAP70P43403 619 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 STK38Q15208 465 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
CDH1-214ENST00000621016 EYA2O00167 538 aa12.39□□□□□ -0.43
CDH1-214ENST00000621016 RALYLQ86SE5 291 aaKnown RBP12.39□□□□□ -0.43
CDH1-214ENST00000621016 MYL10Q9BUA6 226 aa12.39□□□□□ -0.43
CDH1-214ENST00000621016 ZNF215Q9UL58 517 aaPredicted RBP12.39□□□□□ -0.43
CDH1-214ENST00000621016 MEGF6O75095 1541 aa12.39□□□□□ -0.43
CDH1-214ENST00000621016 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
CDH1-214ENST00000621016 CACTINQ8WUQ7 758 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms