RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
CNTNAP3B-214ENST00000618777 PPP1R7Q15435 360 aa18.49■□□□□ 0.55
CNTNAP3B-214ENST00000618777 MUM1Q2TAK8 710 aa18.49■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ABCF2Q9UG63 623 aa18.49■□□□□ 0.55
CNTNAP3B-214ENST00000618777 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ZNF131P52739 623 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 TRIM14Q14142 442 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 PPFIA2O75334 1257 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 IRX1P78414 480 aaPredicted RBP18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ATL3Q6DD88 541 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ARMC2Q8NEN0 867 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ALG1Q9BT22 464 aa18.48■□□□□ 0.55
CNTNAP3B-214ENST00000618777 PAK2Q13177 524 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 CCDC92Q53HC0 331 aaPredicted RBP18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 MORC4Q8TE76 937 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 BTBD11A6QL63 1104 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ARHGAP6O43182 974 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 SYCP3Q8IZU3 236 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 VPS52Q8N1B4 723 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 STMN1P16949 149 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 STAG1Q8WVM7 1258 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 TXNDC9O14530 226 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 MARCKSP29966 332 aaPredicted RBP18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 CCDC170Q8IYT3 715 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 CXorf56Q9H5V9 222 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 FAF1Q9UNN5 650 aaPredicted RBP18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 NCOA2Q15596 1464 aa18.47■□□□□ 0.55
CNTNAP3B-214ENST00000618777 GNGT1P63211 74 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ZGPATQ8N5A5 531 aaKnown RBP18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 CREB3O43889 395 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 EXOC4Q96A65 974 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 LARSQ9P2J5 1176 aaKnown RBP18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 KLF18A0A0U1RQI7 1052 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 ZBTB22O15209 634 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 CABP4P57796 275 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 SDCCAG8Q86SQ7 713 aaPredicted RBP18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 SMC1BQ8NDV3 1235 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 RAB3IPQ96QF0 476 aaPredicted RBP18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 PABPN1LA6NDY0 278 aaKnown RBP18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 GMNNO75496 209 aa18.46■□□□□ 0.55
CNTNAP3B-214ENST00000618777 MED4Q9NPJ6 270 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ATP6V0A2Q9Y487 856 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 NDC80O14777 642 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 COG7P83436 770 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 MTMR3Q13615 1198 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 BICD1Q96G01 975 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 PCDHB15Q9Y5E8 787 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TBCAO75347 108 aaKnown RBP18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 FAM71BQ8TC56 605 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 RPGRIP1Q96KN7 1286 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 THUMPD2Q9BTF0 503 aaKnown RBP18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 GEMIN8Q9NWZ8 242 aaKnown RBP18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 RANBP1P43487 201 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CCT5P48643 541 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 IRX4P78413 519 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CLUL1Q15846 466 aa18.45■□□□□ 0.54
CNTNAP3B-214ENST00000618777 IGHMBP2P38935 993 aaKnown RBP18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 USP37Q86T82 979 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 PLCB3Q01970 1234 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 E2F5Q15329 346 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CYP26C1Q6V0L0 522 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 SND1Q7KZF4 910 aaKnown RBP eCLIP18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TXNDC16Q9P2K2 825 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CUL5Q93034 780 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TSC22D3Q99576 134 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CABP1Q9NZU7 370 aa18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 DNAJC8O75937 253 aaPredicted RBP18.44■□□□□ 0.54
CNTNAP3B-214ENST00000618777 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ARID5AQ03989 594 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 IGSF22Q8N9C0 903 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ZNF444Q8N0Y2 327 aaPredicted RBP18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 DHX58Q96C10 678 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 SSX2IPQ9Y2D8 614 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ATAD2Q6PL18 1390 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 PDE1AP54750 535 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ABTB1Q969K4 478 aaPredicted RBP18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 PLCB1Q9NQ66 1216 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 UTP11Q9Y3A2 253 aaKnown RBP18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 F6X3S4 739 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ASIC1P78348 528 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ARHGAP45Q92619 1136 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 STX17P56962 302 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 FAN1Q9Y2M0 1017 aa18.43■□□□□ 0.54
CNTNAP3B-214ENST00000618777 RNF40O75150 1001 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 SEL1L2Q5TEA6 688 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 BRAPQ7Z569 592 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CAPS2Q9BXY5 557 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 GOLGA8KD6RF30 607 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TRPC3Q13507 836 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms