RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 PPP1R9BQ96SB3 815 aa30.13■■■□□ 2.41
VEGFC-202ENST00000618562 DSCC1Q9BVC3 393 aa30.13■■■□□ 2.41
VEGFC-202ENST00000618562 BCAMP50895 628 aa30.13■■■□□ 2.41
VEGFC-202ENST00000618562 SPATA5Q8NB90 893 aa30.13■■■□□ 2.41
VEGFC-202ENST00000618562 CYP46A1Q9Y6A2 500 aa30.13■■■□□ 2.41
VEGFC-202ENST00000618562 APPBP2Q92624 585 aa30.12■■■□□ 2.41
VEGFC-202ENST00000618562 TRIM44Q96DX7 344 aaPredicted RBP30.12■■■□□ 2.41
VEGFC-202ENST00000618562 DOCK2Q92608 1830 aa30.12■■■□□ 2.41
VEGFC-202ENST00000618562 WTIPA6NIX2 430 aaPredicted RBP30.11■■■□□ 2.41
VEGFC-202ENST00000618562 APBA3O96018 575 aa30.11■■■□□ 2.41
VEGFC-202ENST00000618562 COL9A3Q14050 684 aaPredicted RBP30.11■■■□□ 2.41
VEGFC-202ENST00000618562 WASHC4Q2M389 1173 aa30.11■■■□□ 2.41
VEGFC-202ENST00000618562 ZSCAN31Q96LW9 406 aaPredicted RBP30.11■■■□□ 2.41
VEGFC-202ENST00000618562 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.11■■■□□ 2.41
VEGFC-202ENST00000618562 HSPD1P10809 573 aaKnown RBP30.11■■■□□ 2.41
VEGFC-202ENST00000618562 CLCN1P35523 988 aa30.11■■■□□ 2.41
VEGFC-202ENST00000618562 SH2B1Q9NRF2 756 aaPredicted RBP30.11■■■□□ 2.41
VEGFC-202ENST00000618562 TMEM63CQ9P1W3 806 aa30.11■■■□□ 2.41
VEGFC-202ENST00000618562 RGS17Q9UGC6 210 aaPredicted RBP30.11■■■□□ 2.41
VEGFC-202ENST00000618562 UBE4AQ14139 1066 aa30.1■■■□□ 2.41
VEGFC-202ENST00000618562 PRR5LQ6MZQ0 368 aa30.1■■■□□ 2.41
VEGFC-202ENST00000618562 PDRG1Q9NUG6 133 aa30.1■■■□□ 2.41
VEGFC-202ENST00000618562 RBM27Q9P2N5 1060 aaKnown RBP30.1■■■□□ 2.41
VEGFC-202ENST00000618562 PSMA5P28066 241 aa30.1■■■□□ 2.41
VEGFC-202ENST00000618562 ADD2P35612 726 aa30.1■■■□□ 2.41
VEGFC-202ENST00000618562 PUS7LQ9H0K6 701 aaKnown RBP30.1■■■□□ 2.41
VEGFC-202ENST00000618562 CYP21A2P08686 494 aa30.09■■■□□ 2.41
VEGFC-202ENST00000618562 HMGB2P26583 209 aaKnown RBP30.09■■■□□ 2.41
VEGFC-202ENST00000618562 ZNF827Q17R98 1081 aa30.08■■■□□ 2.41
VEGFC-202ENST00000618562 LRSAM1Q6UWE0 723 aa30.08■■■□□ 2.41
VEGFC-202ENST00000618562 TNS1Q9HBL0 1735 aaKnown RBP30.08■■■□□ 2.41
VEGFC-202ENST00000618562 IDH1O75874 414 aaKnown RBP30.08■■■□□ 2.41
VEGFC-202ENST00000618562 SLC9C2Q5TAH2 1124 aa30.08■■■□□ 2.41
VEGFC-202ENST00000618562 ZSCAN25Q6NSZ9 544 aa30.08■■■□□ 2.41
VEGFC-202ENST00000618562 ZNF804BA4D1E1 1349 aa30.07■■■□□ 2.4
VEGFC-202ENST00000618562 TMEM87AQ8NBN3 555 aa30.07■■■□□ 2.4
VEGFC-202ENST00000618562 NSFL1CQ9UNZ2 370 aaKnown RBP30.07■■■□□ 2.4
VEGFC-202ENST00000618562 SMC3Q9UQE7 1217 aa30.07■■■□□ 2.4
VEGFC-202ENST00000618562 SYAP1Q96A49 352 aaPredicted RBP30.07■■■□□ 2.4
VEGFC-202ENST00000618562 LARP6Q9BRS8 491 aaKnown RBP30.07■■■□□ 2.4
VEGFC-202ENST00000618562 ESPNB1AK53 854 aa30.06■■■□□ 2.4
VEGFC-202ENST00000618562 FOXP2O15409 715 aa30.06■■■□□ 2.4
VEGFC-202ENST00000618562 ZSCAN22P10073 491 aaPredicted RBP30.06■■■□□ 2.4
VEGFC-202ENST00000618562 KRT32Q14532 448 aa30.06■■■□□ 2.4
VEGFC-202ENST00000618562 SERPINB2P05120 415 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 UBE3CQ15386 1083 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 BLOC1S2Q6QNY1 142 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 AKT1S1Q96B36 256 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 WWC3Q9ULE0 1092 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 STX6O43752 255 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 GYG1P46976 350 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 TFCP2L1Q9NZI6 479 aa30.05■■■□□ 2.4
VEGFC-202ENST00000618562 PDE6AP16499 860 aa30.04■■■□□ 2.4
VEGFC-202ENST00000618562 DDR1Q08345 913 aa30.04■■■□□ 2.4
VEGFC-202ENST00000618562 TCHHQ07283 1943 aa30.04■■■□□ 2.4
VEGFC-202ENST00000618562 SYT1P21579 422 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 RPS6KB1P23443 525 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 POTEAQ6S8J7 498 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 RBSNQ9H1K0 784 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 LAMA4Q16363 1823 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 ZNF532Q9HCE3 1301 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 TCRBV5S4A2TA0A5A2 114 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 GPAA1O43292 621 aa30.03■■■□□ 2.4
VEGFC-202ENST00000618562 A0A0G2JLW4 131 aa30.02■■■□□ 2.4
VEGFC-202ENST00000618562 LARGE1O95461 756 aa30.02■■■□□ 2.4
VEGFC-202ENST00000618562 ATP6V1DQ9Y5K8 247 aa30.02■■■□□ 2.4
VEGFC-202ENST00000618562 STOX1Q6ZVD7 989 aa30.02■■■□□ 2.4
VEGFC-202ENST00000618562 ANKRD2Q9GZV1 360 aa30.02■■■□□ 2.4
VEGFC-202ENST00000618562 SYCE3A1L190 88 aa30.01■■■□□ 2.39
VEGFC-202ENST00000618562 POLRMTO00411 1230 aaKnown RBP30.01■■■□□ 2.39
VEGFC-202ENST00000618562 GRAPQ13588 217 aa30.01■■■□□ 2.39
VEGFC-202ENST00000618562 GRAPLQ8TC17 118 aaPredicted RBP30.01■■■□□ 2.39
VEGFC-202ENST00000618562 TCEANC2Q96MN5 208 aa30.01■■■□□ 2.39
VEGFC-202ENST00000618562 NEK1Q96PY6 1258 aa30.01■■■□□ 2.39
VEGFC-202ENST00000618562 IQSEC3Q9UPP2 1182 aaPredicted RBP30.01■■■□□ 2.39
VEGFC-202ENST00000618562 COL1A1P02452 1464 aaPredicted RBP30■■■□□ 2.39
VEGFC-202ENST00000618562 ST5P78524 1137 aa30■■■□□ 2.39
VEGFC-202ENST00000618562 USP48Q86UV5 1035 aa30■■■□□ 2.39
VEGFC-202ENST00000618562 FAM84BQ96KN1 310 aaPredicted RBP30■■■□□ 2.39
VEGFC-202ENST00000618562 KLRK1P26718 216 aa30■■■□□ 2.39
VEGFC-202ENST00000618562 CRY2Q49AN0 593 aa30■■■□□ 2.39
VEGFC-202ENST00000618562 TTLL5Q6EMB2 1281 aa30■■■□□ 2.39
VEGFC-202ENST00000618562 CCDC83Q8IWF9 413 aa30■■■□□ 2.39
VEGFC-202ENST00000618562 ALDH8A1Q9H2A2 487 aaPredicted RBP30■■■□□ 2.39
VEGFC-202ENST00000618562 F13A1P00488 732 aa29.99■■■□□ 2.39
VEGFC-202ENST00000618562 MAP3K12Q12852 859 aa29.99■■■□□ 2.39
VEGFC-202ENST00000618562 CAVIN4Q5BKX8 364 aa29.99■■■□□ 2.39
VEGFC-202ENST00000618562 COL23A1Q86Y22 540 aaPredicted RBP29.99■■■□□ 2.39
VEGFC-202ENST00000618562 RGPD3A6NKT7 1758 aaPredicted RBP29.99■■■□□ 2.39
VEGFC-202ENST00000618562 RGPD4Q7Z3J3 1758 aa29.99■■■□□ 2.39
VEGFC-202ENST00000618562 PDIA4P13667 645 aaKnown RBP29.99■■■□□ 2.39
VEGFC-202ENST00000618562 GNL3LQ9NVN8 582 aaKnown RBP29.99■■■□□ 2.39
VEGFC-202ENST00000618562 ANKRD1Q15327 319 aa29.98■■■□□ 2.39
VEGFC-202ENST00000618562 GJB2P29033 226 aa29.97■■■□□ 2.39
VEGFC-202ENST00000618562 SLC51AQ86UW1 340 aa29.97■■■□□ 2.39
VEGFC-202ENST00000618562 MAGEB6Q8N7X4 407 aa29.97■■■□□ 2.39
VEGFC-202ENST00000618562 TOB2Q14106 344 aaPredicted RBP29.97■■■□□ 2.39
VEGFC-202ENST00000618562 FBXO33Q7Z6M2 555 aa29.97■■■□□ 2.39
VEGFC-202ENST00000618562 TPCN1Q9ULQ1 816 aa29.97■■■□□ 2.39
VEGFC-202ENST00000618562 FGAP02671 866 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms