RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 DSG3P32926 999 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 GJA5P36382 358 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 CTSWP56202 376 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 DUSP27Q5VZP5 1158 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 NKX2-3Q8TAU0 364 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 MYD88Q99836 296 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 HTATIP2Q9BUP3 242 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 ANKRD2Q9GZV1 360 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 PRO3102Q9H379 93 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 FZD1Q9UP38 647 aa10.08□□□□□ -0.8
CBWD1-227ENST00000618361 WTIPA6NIX2 430 aaPredicted RBP10.07□□□□□ -0.8
CBWD1-227ENST00000618361 FKBP1AP62942 108 aaKnown RBP10.07□□□□□ -0.8
CBWD1-227ENST00000618361 GTF2IP78347 998 aa10.07□□□□□ -0.8
CBWD1-227ENST00000618361 KIF22Q14807 665 aa10.07□□□□□ -0.8
CBWD1-227ENST00000618361 TXNRD3Q86VQ6 643 aa10.07□□□□□ -0.8
CBWD1-227ENST00000618361 TTLL11Q8NHH1 800 aa10.07□□□□□ -0.8
CBWD1-227ENST00000618361 CCDC85AQ96PX6 553 aaPredicted RBP10.07□□□□□ -0.8
CBWD1-227ENST00000618361 METTL22Q9BUU2 404 aaPredicted RBP10.07□□□□□ -0.8
CBWD1-227ENST00000618361 ZCCHC17Q9NP64 241 aaKnown RBP10.07□□□□□ -0.8
CBWD1-227ENST00000618361 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
CBWD1-227ENST00000618361 SPDYE2BA6NHP3 402 aa10.06□□□□□ -0.8
CBWD1-227ENST00000618361 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
CBWD1-227ENST00000618361 SPDYE6P0CI01 402 aa10.06□□□□□ -0.8
CBWD1-227ENST00000618361 CAPN2P17655 700 aa10.06□□□□□ -0.8
CBWD1-227ENST00000618361 GTF2A2P52657 109 aa10.06□□□□□ -0.8
CBWD1-227ENST00000618361 TAF1CQ15572 869 aaPredicted RBP10.06□□□□□ -0.8
CBWD1-227ENST00000618361 NBPF12Q5TAG4 269 aaPredicted RBP10.06□□□□□ -0.8
CBWD1-227ENST00000618361 OPTNQ96CV9 577 aa10.06□□□□□ -0.8
CBWD1-227ENST00000618361 CHMP4AQ9BY43 222 aa10.06□□□□□ -0.8
CBWD1-227ENST00000618361 CD209Q9NNX6 404 aa10.06□□□□□ -0.8
CBWD1-227ENST00000618361 TLR2O60603 784 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 MYCP01106 439 aaPredicted RBP10.05□□□□□ -0.8
CBWD1-227ENST00000618361 IGHMBP2P38935 993 aaKnown RBP10.05□□□□□ -0.8
CBWD1-227ENST00000618361 TNFAIP1Q13829 316 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 RASA3Q14644 834 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 CFAP100Q494V2 611 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 C15orf52Q6ZUT6 534 aaKnown RBP10.05□□□□□ -0.8
CBWD1-227ENST00000618361 UBE2Q1Q7Z7E8 422 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 GREM2Q9H772 168 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 PHAXQ9H814 394 aaKnown RBP10.05□□□□□ -0.8
CBWD1-227ENST00000618361 TRIM35Q9UPQ4 493 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
CBWD1-227ENST00000618361 BRCA2P51587 3418 aa10.05□□□□□ -0.8
CBWD1-227ENST00000618361 ZNF646O15015 1829 aaPredicted RBP10.05□□□□□ -0.8
CBWD1-227ENST00000618361 SZT2Q5T011 3432 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 CCL15-CCL14A0A0B4J2E2 113 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 GJA8P48165 433 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 LACTBP83111 547 aaPredicted RBP10.04□□□□□ -0.8
CBWD1-227ENST00000618361 CCL15Q16663 113 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 HELBQ8NG08 1087 aaPredicted RBP10.04□□□□□ -0.8
CBWD1-227ENST00000618361 SH3TC2Q8TF17 1288 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 SHISA4Q96DD7 197 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 PRMT6Q96LA8 375 aaPredicted RBP10.04□□□□□ -0.8
CBWD1-227ENST00000618361 CEP290O15078 2479 aa10.04□□□□□ -0.8
CBWD1-227ENST00000618361 CLRN2A0PK11 232 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 GJB1P08034 283 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 IL1R1P14778 569 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 HOXD10P28358 340 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 MAP3K9P80192 1104 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.03□□□□□ -0.8
CBWD1-227ENST00000618361 FAM43AQ8N2R8 423 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 JARID2Q92833 1246 aaPredicted RBP10.03□□□□□ -0.8
CBWD1-227ENST00000618361 MPHOSPH8Q99549 860 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 ELP3Q9H9T3 547 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 IRS2Q9Y4H2 1338 aa10.03□□□□□ -0.8
CBWD1-227ENST00000618361 CENPFP49454 3210 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 ZBTB7BO15156 539 aaPredicted RBP10.02□□□□□ -0.81
CBWD1-227ENST00000618361 CETPP11597 493 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 KLRK1P26718 216 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 KCNJ4P48050 445 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 NEUROD2Q15784 382 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.02□□□□□ -0.81
CBWD1-227ENST00000618361 RUNDC1Q96C34 613 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 PLA2G12BQ9BX93 195 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 CSADQ9Y600 493 aa10.02□□□□□ -0.81
CBWD1-227ENST00000618361 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 H7C1W4 665 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 IGKV5-2P06315 115 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 CSF1RP07333 972 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 ZNF853P0CG23 659 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 ITGA6P23229 1130 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 CHRNDQ07001 517 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 VGLL4Q14135 290 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 CCDC30Q5VVM6 783 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 KSR2Q6VAB6 950 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 TEPSINQ96N21 525 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 SRRDQ9UH36 339 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 MAP3K2Q9Y2U5 619 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 PCDHAC2Q9Y5I4 1007 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 CUL9Q8IWT3 2517 aa10.01□□□□□ -0.81
CBWD1-227ENST00000618361 EVI5O60447 810 aa10□□□□□ -0.81
CBWD1-227ENST00000618361 GRK4P32298 578 aa10□□□□□ -0.81
CBWD1-227ENST00000618361 TNNI2P48788 182 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms