RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 FLT4P35916 1363 aa12.39□□□□□ -0.43
CPEB1-215ENST00000617958 MYO1BO43795 1136 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 KINO60870 393 aaKnown RBP12.38□□□□□ -0.43
CPEB1-215ENST00000617958 LRRC31Q6UY01 552 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 MSANTD4Q8NCY6 345 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 XPO4Q9C0E2 1151 aaKnown RBP12.38□□□□□ -0.43
CPEB1-215ENST00000617958 SUFUQ9UMX1 484 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 NUTM2BA6NNL0 878 aaPredicted RBP12.38□□□□□ -0.43
CPEB1-215ENST00000617958 NUTM2EB1AL46 878 aaPredicted RBP12.38□□□□□ -0.43
CPEB1-215ENST00000617958 MCM10Q7L590 875 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
CPEB1-215ENST00000617958 ACBD3Q9H3P7 528 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 NFAT5O94916 1531 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 SBNO1A3KN83 1393 aa12.38□□□□□ -0.43
CPEB1-215ENST00000617958 SOS2Q07890 1332 aaPredicted RBP12.38□□□□□ -0.43
CPEB1-215ENST00000617958 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 ADCK5Q3MIX3 580 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 LARP1Q6PKG0 1096 aaKnown RBP12.37□□□□□ -0.43
CPEB1-215ENST00000617958 SSH3Q8TE77 659 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 MIS18AQ9NYP9 233 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 EP400Q96L91 3159 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 ARHGAP6O43182 974 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 C21orf2O43822 256 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 CPA1P15085 419 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 CCDC30Q5VVM6 783 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 NECAB1Q8N987 351 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
CPEB1-215ENST00000617958 VWA3AA6NCI4 1184 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 IKBKBO14920 756 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 CCAR1Q8IX12 1150 aaKnown RBP12.36□□□□□ -0.43
CPEB1-215ENST00000617958 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 IFNKQ9P0W0 207 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 AKAP2Q9Y2D5 859 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 LTN1O94822 1766 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 IP6K1Q92551 441 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 STRN4Q9NRL3 753 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 RGPD5Q99666 1765 aa12.36□□□□□ -0.43
CPEB1-215ENST00000617958 MTHFSDQ2M296 383 aaKnown RBP12.35□□□□□ -0.43
CPEB1-215ENST00000617958 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 CACNA1FO60840 1977 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
CPEB1-215ENST00000617958 GNL2Q13823 731 aaKnown RBP12.35□□□□□ -0.43
CPEB1-215ENST00000617958 HSP90B2PQ58FF3 399 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 PRPF40BQ6NWY9 871 aaKnown RBP12.35□□□□□ -0.43
CPEB1-215ENST00000617958 KIFC2Q96AC6 838 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 ABCC6O95255 1503 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 ALS2Q96Q42 1657 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 TDO2P48775 406 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 E2F4Q16254 413 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 SRGAP1Q7Z6B7 1085 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 FAN1Q9Y2M0 1017 aa12.35□□□□□ -0.43
CPEB1-215ENST00000617958 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
CPEB1-215ENST00000617958 POLA2Q14181 598 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 NAA16Q6N069 864 aaPredicted RBP12.34□□□□□ -0.43
CPEB1-215ENST00000617958 CWC27Q6UX04 472 aaKnown RBP12.34□□□□□ -0.43
CPEB1-215ENST00000617958 PRDM11Q9NQV5 511 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 NLRP2Q9NX02 1062 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 KCNG1Q9UIX4 513 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 PPP2R2CQ9Y2T4 447 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 ATXN2Q99700 1313 aaKnown RBP12.34□□□□□ -0.43
CPEB1-215ENST00000617958 CRB1P82279 1406 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 ERLIN2O94905 339 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
CPEB1-215ENST00000617958 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
CPEB1-215ENST00000617958 CCDC189A1A4V9 331 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 HIP1O00291 1037 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 CALRP27797 417 aaKnown RBP12.33□□□□□ -0.44
CPEB1-215ENST00000617958 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.446e-8■■■■■ 39.3
CPEB1-215ENST00000617958 PTH1RQ03431 593 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 CNNM3Q8NE01 707 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 MAP4K1Q92918 833 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
CPEB1-215ENST00000617958 KIF1AQ12756 1690 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 A0A1W2PQ27 194 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 A0A1W2PQ64 194 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 A0A1W2PQD8 194 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 KIF3CO14782 793 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 RPS6KB1P23443 525 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 HSP90AB4PQ58FF6 505 aa12.33□□□□□ -0.44
CPEB1-215ENST00000617958 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms