RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	GIMAP7	Q8NHV1	300 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	RABGGTA	Q92696	567 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.35	□□□□□ -0.27
TP53-222	ENST00000617185	EPC1	Q9H2F5	836 aa		13.35	□□□□□ -0.27
TP53-222	ENST00000617185	GIGYF1	O75420	1035 aa	Predicted RBP	13.34	□□□□□ -0.27
TP53-222	ENST00000617185	HSPA4	P34932	840 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	SET	Q01105	290 aa	Predicted RBP	13.34	□□□□□ -0.27
TP53-222	ENST00000617185	BRD3	Q15059	726 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	AMOT	Q4VCS5	1084 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.34	□□□□□ -0.27
TP53-222	ENST00000617185	TTC14	Q96N46	770 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	PDE11A	Q9HCR9	933 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	AK2	P54819	239 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	BIRC2	Q13490	618 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	A1CF	Q9NQ94	594 aa	Known RBP	13.34	□□□□□ -0.27
TP53-222	ENST00000617185	AKAP2	Q9Y2D5	859 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	PARP3	Q9Y6F1	533 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	MST1R	Q04912	1400 aa		13.34	□□□□□ -0.27
TP53-222	ENST00000617185	GBP6	Q6ZN66	633 aa		13.33	□□□□□ -0.27
TP53-222	ENST00000617185	PA2G4	Q9UQ80	394 aa	Known RBP	13.33	□□□□□ -0.27
TP53-222	ENST00000617185	STRCP1	A6NGW2	1772 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	SCP2	P22307	547 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	SFPQ	P23246	707 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
TP53-222	ENST00000617185	BEND3	Q5T5X7	828 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	RUFY3	Q7L099	469 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	RSRC2	Q7L4I2	434 aa	Known RBP	13.33	□□□□□ -0.28
TP53-222	ENST00000617185	HDX	Q7Z353	690 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	KAT2B	Q92831	832 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	MIEF2	Q96C03	454 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	GNL3L	Q9NVN8	582 aa	Known RBP	13.33	□□□□□ -0.28
TP53-222	ENST00000617185	SH3BP1	Q9Y3L3	701 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	MED1	Q15648	1581 aa	Predicted RBP	13.33	□□□□□ -0.28
TP53-222	ENST00000617185	SOS1	Q07889	1333 aa	Predicted RBP	13.33	□□□□□ -0.28
TP53-222	ENST00000617185	SSR1	P43307	286 aa	Known RBP	13.33	□□□□□ -0.28
TP53-222	ENST00000617185	SEMA3F	Q13275	785 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	STX1A	Q16623	288 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	FAN1	Q9Y2M0	1017 aa		13.33	□□□□□ -0.28
TP53-222	ENST00000617185	ADCY9	O60503	1353 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.32	□□□□□ -0.28
TP53-222	ENST00000617185		H0YHG0	523 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	NR1I2	O75469	434 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	SARNP	P82979	210 aa	Known RBP	13.32	□□□□□ -0.28
TP53-222	ENST00000617185	TRIM65	Q6PJ69	517 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.32	□□□□□ -0.28
TP53-222	ENST00000617185	SPATA32	Q96LK8	384 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	KLHL33	A6NCF5	533 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	TAT	P17735	454 aa	Predicted RBP	13.32	□□□□□ -0.28
TP53-222	ENST00000617185	MCM6	Q14566	821 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.32	□□□□□ -0.28
TP53-222	ENST00000617185	STRN4	Q9NRL3	753 aa		13.32	□□□□□ -0.28
TP53-222	ENST00000617185	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.32	□□□□□ -0.28
TP53-222	ENST00000617185	DBF4	Q9UBU7	674 aa	Predicted RBP	13.32	□□□□□ -0.28
TP53-222	ENST00000617185	ERCC3	P19447	782 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	TXLNA	P40222	546 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	CADPS2	Q86UW7	1296 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	GOLGA1	Q92805	767 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	MPHOSPH8	Q99549	860 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	MEGF6	O75095	1541 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	CYP27B1	O15528	508 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	PPP2R3A	Q06190	1150 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	OS9	Q13438	667 aa	Predicted RBP	13.31	□□□□□ -0.28
TP53-222	ENST00000617185	NEDD9	Q14511	834 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	HSP90B2P	Q58FF3	399 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	VPS53	Q5VIR6	699 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	KCNV1	Q6PIU1	500 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	CCDC83	Q8IWF9	413 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	CNNM3	Q8NE01	707 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	KLHDC4	Q8TBB5	520 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	FAM71B	Q8TC56	605 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	DDX11	Q96FC9	970 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	ZNF496	Q96IT1	587 aa	Predicted RBP	13.31	□□□□□ -0.28
TP53-222	ENST00000617185	IL25	Q9H293	177 aa		13.31	□□□□□ -0.28
TP53-222	ENST00000617185	BSDC1	Q9NW68	430 aa	Predicted RBP	13.31	□□□□□ -0.28
TP53-222	ENST00000617185	ARMCX5	Q6P1M9	558 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	ZNF790	Q6PG37	636 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	BRINP3	Q76B58	766 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	BICD2	Q8TD16	824 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.3	□□□□□ -0.28
TP53-222	ENST00000617185	SLIT3	O75094	1523 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	PHKG2	P15735	406 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	LIG3	P49916	1009 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	IRX1	P78414	480 aa	Predicted RBP	13.3	□□□□□ -0.28
TP53-222	ENST00000617185	MAP3K9	P80192	1104 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	NBPF10	Q6P3W6	841 aa	Known RBP	13.3	□□□□□ -0.28
TP53-222	ENST00000617185	FAXDC2	Q96IV6	333 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	SIL1	Q9H173	461 aa		13.3	□□□□□ -0.28
TP53-222	ENST00000617185	BICC1	Q9H694	974 aa	Known RBP	13.3	□□□□□ -0.28
TP53-222	ENST00000617185	CTAGE5	O15320	804 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	ELF1	P32519	619 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	TICAM2	Q86XR7	235 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	DHX40	Q8IX18	779 aa	Known RBP	13.29	□□□□□ -0.28
TP53-222	ENST00000617185	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.29	□□□□□ -0.28
TP53-222	ENST00000617185	PLCD4	Q9BRC7	762 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	LARP6	Q9BRS8	491 aa	Known RBP	13.29	□□□□□ -0.28
TP53-222	ENST00000617185	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.29	□□□□□ -0.28
TP53-222	ENST00000617185	BABAM1	Q9NWV8	329 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.29	□□□□□ -0.28
TP53-222	ENST00000617185	NBPF9	Q3BBW0	867 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.29	□□□□□ -0.28
TP53-222	ENST00000617185	JPH2	Q9BR39	696 aa	Predicted RBP	13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms