RNA–Protein interactions for RNA: ENST00000616579.4

TMPRSS4-219, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMPRSS4, Length 3,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-219ENST00000616579 TRIM29Q14134 588 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 C11orf57Q6ZUT1 292 aaPredicted RBP10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 ATG9AQ7Z3C6 839 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 OSBP2Q969R2 916 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 RCOR1Q9UKL0 485 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 COL15A1P39059 1388 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 NPHP1O15259 732 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 ZFYP08048 801 aaPredicted RBP10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 SKILP12757 684 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 CCDC144CPQ8IYA2 1237 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 RGPD2P0DJD1 1756 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 M0R2C6 588 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 ZAP70P43403 619 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 ATP2B3Q16720 1220 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 SMARCC2Q8TAQ2 1214 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 ZNF274Q96GC6 653 aaPredicted RBP10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 C1orf167Q5SNV9 1468 aa10.05□□□□□ -0.8
TMPRSS4-219ENST00000616579 SLC3A2P08195 630 aaKnown RBP10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 RXRAP19793 462 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 MARCKSP29966 332 aaPredicted RBP10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 PTPN14Q15678 1187 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 TMEM94Q12767 1356 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 MEGF6O75095 1541 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 SPTLC2O15270 562 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 IGSF3O75054 1194 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 FGAP02671 866 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 MICU3Q86XE3 530 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 GPR108Q9NPR9 543 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 MED1Q15648 1581 aaPredicted RBP10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 RRP12Q5JTH9 1297 aaKnown RBP10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 SLC9C2Q5TAH2 1124 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 ATL3Q6DD88 541 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 PCDHA7Q9UN72 937 aa10.04□□□□□ -0.8
TMPRSS4-219ENST00000616579 CCDC69A6NI79 296 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 GPAA1O43292 621 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 STARD3NLO95772 234 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 IL2RBP14784 551 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 KCNG4Q8TDN1 519 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 APPBP2Q92624 585 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 GOLPH3LQ9H4A5 285 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 RFX7Q2KHR2 1363 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 ATP2B1P20020 1258 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 EXOSC10Q01780 885 aaKnown RBP10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 TCIRG1Q13488 830 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 HOMER1Q86YM7 354 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 CCDC24Q8N4L8 307 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 GJB4Q9NTQ9 266 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 CARMIL3Q8ND23 1372 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 NEMFO60524 1076 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 CASP7P55210 303 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 TRMT112Q9UI30 125 aaKnown RBP10.03□□□□□ -0.8
TMPRSS4-219ENST00000616579 KDM3BQ7LBC6 1761 aa10.02□□□□□ -0.8
TMPRSS4-219ENST00000616579 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 ANKRD18BA2A2Z9 1011 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 ERVV-2B6SEH9 535 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 METAP2P50579 478 aaKnown RBP eCLIP10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 CCDC144BQ3MJ40 725 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 TMC6Q7Z403 805 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 LRP10Q7Z4F1 713 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 PLA2G4DQ86XP0 818 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 DNAJC10Q8IXB1 793 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 JMYQ8N9B5 988 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 ALG1Q9BT22 464 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 CLIC4Q9Y696 253 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 ADALQ6DHV7 355 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 CCDC82Q8N4S0 544 aa10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 PUS7LQ9H0K6 701 aaKnown RBP10.02□□□□□ -0.81
TMPRSS4-219ENST00000616579 CDKL5O76039 1030 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 NDUFA8P51970 172 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 HELBQ8NG08 1087 aaPredicted RBP10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 PAXBP1Q9Y5B6 917 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 TUBGCP6Q96RT7 1819 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 PALLDQ8WX93 1383 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 SMTNL1A8MU46 457 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 CIAO1O76071 339 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 SERPINC1P01008 464 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 SFPQP23246 707 aaKnown RBP eCLIP10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 SCARF1Q14162 830 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 MYSM1Q5VVJ2 828 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 RBM43Q6ZSC3 357 aaKnown RBP10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 LRRC8AQ8IWT6 810 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 FBXO18Q8NFZ0 1043 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 ITGA6P23229 1130 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 SAFBQ15424 915 aaKnown RBP eCLIP10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 BICDL1Q6ZP65 573 aa10.01□□□□□ -0.81
TMPRSS4-219ENST00000616579 IFNKQ9P0W0 207 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms