RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 RNF217Q8TC41 542 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 WDR24Q96S15 920 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 FANCLQ9NW38 375 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 ATP1A3P13637 1013 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 PCK1P35558 622 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 SARM1Q6SZW1 724 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 LRRC31Q6UY01 552 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 CEP120Q8N960 986 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 FUT8Q9BYC5 575 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 CABP1Q9NZU7 370 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 PLEKHG2Q9H7P9 1386 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 ANKRD18BA2A2Z9 1011 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 EIF4E1BA6NMX2 242 aaKnown RBP15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 HGSO14964 777 aaPredicted RBP15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 SETSIPP0DME0 302 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 SLC8A1P32418 973 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 A2MP01023 1474 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 SCRN1Q12765 414 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 CCDC40Q4G0X9 1142 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 USP28Q96RU2 1077 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 L2HGDHQ9H9P8 463 aa15.36■□□□□ 0.05
PPP4R3B-205ENST00000616288 PSME1Q06323 249 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 OTUD7BQ6GQQ9 843 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 ARMCX5Q6P1M9 558 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 RIN2Q8WYP3 895 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 ADGRF5Q8IZF2 1346 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 ZNF202O95125 648 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 PIP4K2AP48426 406 aaPredicted RBP15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 NLRP12P59046 1061 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 PSMB7Q99436 277 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 EMILIN1Q9Y6C2 1016 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 PTPDC1A2A3K4 754 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 SMIM24O75264 130 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 PDCLQ13371 301 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 CCDC122Q5T0U0 273 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 SLC35F6Q8N357 371 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 SH3GL3Q99963 347 aa15.35■□□□□ 0.05
PPP4R3B-205ENST00000616288 VAV2P52735 878 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 TRMT44Q8IYL2 757 aaKnown RBP15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 ZRANB2O95218 330 aaKnown RBP eCLIP15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 SPECC1LQ69YQ0 1117 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 TPX2Q9ULW0 747 aaKnown RBP15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 ATP8B2P98198 1209 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 TCP11Q8WWU5 503 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 NFE2L3Q9Y4A8 694 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 FLIIQ13045 1269 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 ARFGAP2Q8N6H7 521 aa15.34■□□□□ 0.05
PPP4R3B-205ENST00000616288 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
PPP4R3B-205ENST00000616288 PNMA6EA0A0J9YXQ4 647 aa15.33■□□□□ 0.05
PPP4R3B-205ENST00000616288 SUGP1Q8IWZ8 645 aaKnown RBP15.33■□□□□ 0.05
PPP4R3B-205ENST00000616288 ANKS4BQ8N8V4 417 aa15.33■□□□□ 0.05
PPP4R3B-205ENST00000616288 IRX2Q9BZI1 471 aaPredicted RBP15.33■□□□□ 0.05
PPP4R3B-205ENST00000616288 POLD4Q9HCU8 107 aa15.33■□□□□ 0.05
PPP4R3B-205ENST00000616288 AKAP2Q9Y2D5 859 aa15.33■□□□□ 0.05
PPP4R3B-205ENST00000616288 MACROD2A1Z1Q3 448 aa15.33■□□□□ 0.04
PPP4R3B-205ENST00000616288 NMIQ13287 307 aaPredicted RBP15.33■□□□□ 0.04
PPP4R3B-205ENST00000616288 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.04
PPP4R3B-205ENST00000616288 GOPCQ9HD26 462 aa15.33■□□□□ 0.04
PPP4R3B-205ENST00000616288 NESP48681 1621 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 ENC1O14682 589 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 PTH1RQ03431 593 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 REXO1L1PQ8IX06 675 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 KLC4Q9NSK0 619 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCT6AP40227 531 aaKnown RBP15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 RANBP1P43487 201 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 VSNL1P62760 191 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 TUBB2AQ13885 445 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 EGFL6Q8IUX8 553 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 NFATC2IPQ8NCF5 419 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 PGBD1Q96JS3 809 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 TUBB2BQ9BVA1 445 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 NCOA5Q9HCD5 579 aaKnown RBP15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 TROQ12816 1431 aaPredicted RBP15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 USO1O60763 962 aaKnown RBP15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 AFMP43652 599 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 ZRSR2Q15696 482 aaKnown RBP15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCDC96Q2M329 555 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 ZBTB10Q96DT7 871 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 G3BP2Q9UN86 482 aaKnown RBP15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 ABCC4O15439 1325 aa15.32■□□□□ 0.04
PPP4R3B-205ENST00000616288 IDEP14735 1019 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCDC170Q8IYT3 715 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 DNMT1P26358 1616 aaKnown RBP15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 GGCXP38435 758 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 WHAMMP3Q1A5X7 153 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 GNPTABQ3T906 1256 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 NCAPH2Q6IBW4 605 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 OSBPL5Q9H0X9 879 aaPredicted RBP15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 SUDS3Q9H7L9 328 aaPredicted RBP15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 TTF2Q9UNY4 1162 aaKnown RBP15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms