RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 MXRA7P84157 204 aa21.31■■□□□ 1
SPAST-203ENST00000615843 DMTNQ08495 405 aa21.31■■□□□ 1
SPAST-203ENST00000615843 IFIT1BQ5T764 474 aaKnown RBP21.31■■□□□ 1
SPAST-203ENST00000615843 PPP1R14CQ8TAE6 165 aa21.31■■□□□ 1
SPAST-203ENST00000615843 CUL5Q93034 780 aa21.31■■□□□ 1
SPAST-203ENST00000615843 CARD14Q9BXL6 1004 aa21.31■■□□□ 1
SPAST-203ENST00000615843 CEP83Q9Y592 693 aa21.31■■□□□ 1
SPAST-203ENST00000615843 GPTP24298 496 aa21.31■■□□□ 1
SPAST-203ENST00000615843 NEK11Q8NG66 645 aa21.31■■□□□ 1
SPAST-203ENST00000615843 CCT6AP40227 531 aaKnown RBP21.3■■□□□ 1
SPAST-203ENST00000615843 LACTBP83111 547 aaPredicted RBP21.3■■□□□ 1
SPAST-203ENST00000615843 CRACR2BQ8N4Y2 399 aaPredicted RBP21.3■■□□□ 1
SPAST-203ENST00000615843 SYCP3Q8IZU3 236 aa21.3■■□□□ 1
SPAST-203ENST00000615843 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
SPAST-203ENST00000615843 POLKQ9UBT6 870 aa21.3■■□□□ 1
SPAST-203ENST00000615843 TBCAO75347 108 aaKnown RBP21.3■■□□□ 1
SPAST-203ENST00000615843 HPDP32754 393 aaPredicted RBP21.3■■□□□ 1
SPAST-203ENST00000615843 ZNF652Q9Y2D9 606 aa21.3■■□□□ 1
SPAST-203ENST00000615843 RNF113AO15541 343 aaKnown RBP21.29■■□□□ 1
SPAST-203ENST00000615843 IL15P40933 162 aaPredicted RBP21.29■■□□□ 1
SPAST-203ENST00000615843 ZBTB16Q05516 673 aa21.29■■□□□ 1
SPAST-203ENST00000615843 GRIPAP1Q4V328 841 aa21.29■■□□□ 1
SPAST-203ENST00000615843 UBLCP1Q8WVY7 318 aaPredicted RBP21.29■■□□□ 1
SPAST-203ENST00000615843 SERPINA10Q9UK55 444 aa21.29■■□□□ 1
SPAST-203ENST00000615843 IQUBQ8NA54 791 aa21.29■■□□□ 1
SPAST-203ENST00000615843 IQCGQ9H095 443 aaKnown RBP21.29■■□□□ 1
SPAST-203ENST00000615843 ZNF215Q9UL58 517 aaPredicted RBP21.29■■□□□ 1
SPAST-203ENST00000615843 LMBR1LQ6UX01 489 aa21.28■■□□□ 1
SPAST-203ENST00000615843 CYP26C1Q6V0L0 522 aa21.28■■□□□ 1
SPAST-203ENST00000615843 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
SPAST-203ENST00000615843 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
SPAST-203ENST00000615843 CCDC160A6NGH7 325 aa21.28■■□□□ 1
SPAST-203ENST00000615843 TRIM14Q14142 442 aa21.28■■□□□ 1
SPAST-203ENST00000615843 RABEP2Q9H5N1 569 aa21.28■■□□□ 1
SPAST-203ENST00000615843 SLC27A2O14975 620 aa21.28■■□□□ 1
SPAST-203ENST00000615843 CLNS1AP54105 237 aaKnown RBP21.28■■□□□ 1
SPAST-203ENST00000615843 XAGE3Q8WTP9 111 aa21.28■■□□□ 1
SPAST-203ENST00000615843 SGSM2O43147 1006 aa21.28■■□□□ 1
SPAST-203ENST00000615843 ERCC6LQ2NKX8 1250 aa21.28■■□□□ 1
SPAST-203ENST00000615843 SLC9C2Q5TAH2 1124 aa21.28■■□□□ 1
SPAST-203ENST00000615843 BLMP54132 1417 aaPredicted RBP21.27■■□□□ 1
SPAST-203ENST00000615843 INSRP06213 1382 aa21.27■■□□□ 1
SPAST-203ENST00000615843 SNRPA1P09661 255 aaKnown RBP21.27■■□□□ 1
SPAST-203ENST00000615843 ARHGAP25P42331 645 aa21.27■■□□□ 1
SPAST-203ENST00000615843 ANO1Q5XXA6 986 aa21.27■■□□□ 1
SPAST-203ENST00000615843 C8orf74Q6P047 294 aa21.27■■□□□ 1
SPAST-203ENST00000615843 LLPHQ9BRT6 129 aaKnown RBP21.27■■□□□ 1
SPAST-203ENST00000615843 SLC4A4Q9Y6R1 1079 aa21.27■■□□□ 1
SPAST-203ENST00000615843 GOLGA6BA6NDN3 693 aa21.27■■□□□ 1
SPAST-203ENST00000615843 NLRP12P59046 1061 aa21.27■■□□□ 1
SPAST-203ENST00000615843 SETDB1Q15047 1291 aa21.27■■□□□ 1
SPAST-203ENST00000615843 GPR161Q8N6U8 529 aaKnown RBP21.27■■□□□ 1
SPAST-203ENST00000615843 TTC21AQ8NDW8 1320 aa21.27■■□□□ 1
SPAST-203ENST00000615843 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
SPAST-203ENST00000615843 KRT2P35908 639 aa21.27■■□□□ 1
SPAST-203ENST00000615843 ATP2B3Q16720 1220 aa21.27■■□□□ 1
SPAST-203ENST00000615843 GPT2Q8TD30 523 aa21.27■■□□□ 1
SPAST-203ENST00000615843 MTRF1LQ9UGC7 380 aaKnown RBP21.27■■□□□ 1
SPAST-203ENST00000615843 ZMYM3Q14202 1370 aa21.27■■□□□ 1
SPAST-203ENST00000615843 CDC37L1Q7L3B6 337 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 ACEP12821 1306 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 ACTN2P35609 894 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 EIF4A2Q14240 407 aaKnown RBP21.26■□□□□ 0.99
SPAST-203ENST00000615843 SMC6Q96SB8 1091 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
SPAST-203ENST00000615843 AOX1Q06278 1338 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 KCNH3Q9ULD8 1083 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 GPATCH8Q9UKJ3 1502 aaKnown RBP21.26■□□□□ 0.99
SPAST-203ENST00000615843 SBNO2Q9Y2G9 1366 aa21.26■□□□□ 0.99
SPAST-203ENST00000615843 UTP14CQ5TAP6 766 aaKnown RBP21.25■□□□□ 0.99
SPAST-203ENST00000615843 COPS6Q7L5N1 327 aa21.25■□□□□ 0.99
SPAST-203ENST00000615843 KCNK9Q9NPC2 374 aa21.25■□□□□ 0.99
SPAST-203ENST00000615843 CPSF2Q9P2I0 782 aaKnown RBP21.25■□□□□ 0.99
SPAST-203ENST00000615843 PHF8Q9UPP1 1060 aa21.25■□□□□ 0.99
SPAST-203ENST00000615843 LRMPQ12912 555 aa21.25■□□□□ 0.99
SPAST-203ENST00000615843 VPS16Q9H269 839 aa21.25■□□□□ 0.99
SPAST-203ENST00000615843 ZRANB1Q9UGI0 708 aa21.25■□□□□ 0.99
SPAST-203ENST00000615843 STX8Q9UNK0 236 aa21.25■□□□□ 0.99
SPAST-203ENST00000615843 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
SPAST-203ENST00000615843 STIM2Q9P246 746 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 CTNND2Q9UQB3 1225 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 VIMP08670 466 aaKnown RBP21.24■□□□□ 0.99
SPAST-203ENST00000615843 RXRAP19793 462 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 HEATR3Q7Z4Q2 680 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 IFT74Q96LB3 600 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 BRD3Q15059 726 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 CCDC50Q8IVM0 306 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 ANKIB1Q9P2G1 1089 aa21.24■□□□□ 0.99
SPAST-203ENST00000615843 MAP3K9P80192 1104 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 ERMNQ8TAM6 284 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 CRNKL1Q9BZJ0 848 aaKnown RBP21.23■□□□□ 0.99
SPAST-203ENST00000615843 ZNF202O95125 648 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 MTHFSDQ2M296 383 aaKnown RBP21.23■□□□□ 0.99
SPAST-203ENST00000615843 PPP4R3AQ6IN85 833 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 IFNL2Q8IZJ0 200 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 XPO4Q9C0E2 1151 aaKnown RBP21.23■□□□□ 0.99
SPAST-203ENST00000615843 CALML3P27482 149 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 MAP2K2P36507 400 aa21.23■□□□□ 0.99
SPAST-203ENST00000615843 ANKLE2Q86XL3 938 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms