RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 NR1I2O75469 434 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 LRMPQ12912 555 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 FAM89AQ96GI7 184 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 DNAJC25Q9H1X3 360 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 BTAF1O14981 1849 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 H3BQV1 296 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
ATF3-211ENST00000613954 GABPB1Q06547 395 aaPredicted RBP13.12□□□□□ -0.31
ATF3-211ENST00000613954 RESTQ13127 1097 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 STX1AQ16623 288 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
ATF3-211ENST00000613954 NRBP1Q9UHY1 535 aa13.12□□□□□ -0.31
ATF3-211ENST00000613954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
ATF3-211ENST00000613954 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 TFCP2Q12800 502 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 CEP135Q66GS9 1140 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
ATF3-211ENST00000613954 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 QTRT2Q9H974 415 aaKnown RBP13.11□□□□□ -0.31
ATF3-211ENST00000613954 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
ATF3-211ENST00000613954 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
ATF3-211ENST00000613954 KIF2AO00139 706 aaPredicted RBP13.1□□□□□ -0.31
ATF3-211ENST00000613954 CIAO1O76071 339 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 CSF1RP07333 972 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 PTF1AQ7RTS3 328 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 LRRC8AQ8IWT6 810 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 CCDC8Q9H0W5 538 aaPredicted RBP13.1□□□□□ -0.31
ATF3-211ENST00000613954 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
ATF3-211ENST00000613954 TAF5LO75529 589 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
ATF3-211ENST00000613954 FGD1P98174 961 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 IQCB1Q15051 598 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 TNNI3KQ59H18 835 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 ATG9AQ7Z3C6 839 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 BRF1Q92994 677 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
ATF3-211ENST00000613954 FPGT-TNNI3KV9GXZ4 949 aa13.1□□□□□ -0.31
ATF3-211ENST00000613954 MYH15Q9Y2K3 1946 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 UBN2Q6ZU65 1347 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 EYA2O00167 538 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 DTNBO60941 627 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
ATF3-211ENST00000613954 STK3Q13188 491 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
ATF3-211ENST00000613954 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 KCND1Q9NSA2 647 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 TLR7Q9NYK1 1049 aaKnown RBP13.09□□□□□ -0.31
ATF3-211ENST00000613954 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
ATF3-211ENST00000613954 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
ATF3-211ENST00000613954 BECN2A8MW95 431 aa13.08□□□□□ -0.31
ATF3-211ENST00000613954 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.31
ATF3-211ENST00000613954 DHX8Q14562 1220 aaKnown RBP13.08□□□□□ -0.31
ATF3-211ENST00000613954 PTPN14Q15678 1187 aa13.08□□□□□ -0.31
ATF3-211ENST00000613954 PARP10Q53GL7 1025 aa13.08□□□□□ -0.31
ATF3-211ENST00000613954 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.31
ATF3-211ENST00000613954 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.31
ATF3-211ENST00000613954 ANO10Q9NW15 660 aa13.08□□□□□ -0.31
ATF3-211ENST00000613954 HSP90B1P14625 803 aaKnown RBP13.08□□□□□ -0.32
ATF3-211ENST00000613954 CTSWP56202 376 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 PDE4CQ08493 712 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
ATF3-211ENST00000613954 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 CCDC73Q6ZRK6 1079 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 SYNE4Q8N205 404 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 ZNF397Q8NF99 534 aaPredicted RBP13.08□□□□□ -0.32
ATF3-211ENST00000613954 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 AK7Q96M32 723 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
ATF3-211ENST00000613954 RCOR1Q9UKL0 485 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 ZNF652Q9Y2D9 606 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
ATF3-211ENST00000613954 BCORQ6W2J9 1755 aa13.08□□□□□ -0.32
ATF3-211ENST00000613954 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
ATF3-211ENST00000613954 PDE8AO60658 829 aa13.07□□□□□ -0.32
ATF3-211ENST00000613954 ATP5JP18859 108 aa13.07□□□□□ -0.32
ATF3-211ENST00000613954 GSDMDP57764 484 aa13.07□□□□□ -0.32
ATF3-211ENST00000613954 NYAP1Q6ZVC0 841 aa13.07□□□□□ -0.32
ATF3-211ENST00000613954 ZNF589Q86UQ0 364 aaPredicted RBP13.07□□□□□ -0.32
ATF3-211ENST00000613954 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
ATF3-211ENST00000613954 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
ATF3-211ENST00000613954 ZNF396Q96N95 335 aaPredicted RBP13.07□□□□□ -0.32
ATF3-211ENST00000613954 RGL2O15211 777 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 JAK2O60674 1132 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 KINO60870 393 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms