RNA–Protein interactions for RNA: ENST00000612985.1

RNVU1-4-201, Transcript of RNA, variant U1 small nuclear 4, humanhuman

BASIC

Gene RNVU1-4, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-4-201ENST00000612985 PPM1EQ8WY54 764 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 TSC1Q92574 1164 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 ZNF592Q92610 1267 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 ARHGEF1Q92888 912 aaKnown RBP4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 ZNF622Q969S3 477 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 SPATA32Q96LK8 384 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 TUBB2BQ9BVA1 445 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 GBP3Q9H0R5 595 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 OSBPL5Q9H0X9 879 aaPredicted RBP4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 DEF6Q9H4E7 631 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 ZSCAN16Q9H4T2 348 aaPredicted RBP4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 CBX8Q9HC52 389 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 ANO10Q9NW15 660 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 DNAI1Q9UI46 699 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 ZNF215Q9UL58 517 aaPredicted RBP4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 ZBTB1Q9Y2K1 713 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 RTCBQ9Y3I0 505 aaKnown RBP4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 LRRFIP2Q9Y608 721 aaKnown RBP4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 MRVI1Q9Y6F6 885 aa4.22□□□□□ -1.73
RNVU1-4-201ENST00000612985 USP42Q9H9J4 1324 aaKnown RBP4.21□□□□□ -1.73
RNVU1-4-201ENST00000612985 CHD4Q14839 1912 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 PRAMEF22A3QJZ6 481 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 VPS37CA5D8V6 355 aaPredicted RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 BTBD11A6QL63 1104 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 VGLL3A8MV65 326 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 ZSCAN12O43309 604 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 CBFA2T2O43439 604 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 KIF1CO43896 1103 aaKnown RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 RPS6KA5O75582 802 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 CASTP20810 708 aaKnown RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 SFPQP23246 707 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 MCM3P25205 808 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 GJB2P29033 226 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 TM4SF1P30408 202 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 HOXD11P31277 338 aaPredicted RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 MAGEA9P43362 315 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 EIF4A1P60842 406 aaKnown RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 TAF7Q15545 349 aaPredicted RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 ZSCAN26Q16670 478 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 LRRFIP1Q32MZ4 808 aaKnown RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 TTC31Q49AM3 519 aaPredicted RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 TRAPPC3LQ5T215 181 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 MSL1Q68DK7 614 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 CCDC73Q6ZRK6 1079 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 LRP10Q7Z4F1 713 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 GPR161Q8N6U8 529 aaKnown RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 RGS22Q8NE09 1264 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 FBXO18Q8NFZ0 1043 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 NLGN2Q8NFZ4 835 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 ERCC4Q92889 916 aaPredicted RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 TTC14Q96N46 770 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 MPHOSPH8Q99549 860 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 BPIFA3Q9BQP9 254 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 THUMPD2Q9BTF0 503 aaKnown RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 STK31Q9BXU1 1019 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 ALDH8A1Q9H2A2 487 aaPredicted RBP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 GDPD2Q9HCC8 539 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 ARFGAP3Q9NP61 516 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 CCDC87Q9NVE4 849 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 RSPH14Q9UHP6 348 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 MTMR6Q9Y217 621 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 USP16Q9Y5T5 823 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 CYP46A1Q9Y6A2 500 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 COL15A1P39059 1388 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 ANKRD31Q8N7Z5 1873 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 C10orf71Q711Q0 1435 aa4.21□□□□□ -1.74
RNVU1-4-201ENST00000612985 DLEC1Q9Y238 1755 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 RFX7Q2KHR2 1363 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 CCDC151A5D8V7 595 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 CCDC69A6NI79 296 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 NBPF26B4DH59 902 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 MYO1CO00159 1063 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 CHL1O00533 1208 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 SGSM2O43147 1006 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 KINO60870 393 aaKnown RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 GLRX3O76003 335 aaKnown RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 ZRANB2O95218 330 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 SMC2O95347 1197 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 A1BGP04217 495 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 BRD2P25440 801 aaKnown RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 POLD1P28340 1107 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 ACTN2P35609 894 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 IL6STP40189 918 aaPredicted RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 CLCN6P51797 869 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 AK2P54819 239 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 HNRNPH2P55795 449 aaKnown RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 ETF1P62495 437 aaKnown RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 CCZ1BP86790 482 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 CCZ1P86791 482 aaPredicted RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 SETQ01105 290 aaPredicted RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 DNM1Q05193 864 aaKnown RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 DDR1Q08345 913 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 KRT32Q14532 448 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 BRD3Q15059 726 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 ARHGAP29Q52LW3 1261 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 HSP90B2PQ58FF3 399 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 NBPF10Q6P3W6 841 aaKnown RBP4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 KRBA2Q6ZNG9 492 aa4.2□□□□□ -1.74
RNVU1-4-201ENST00000612985 SRLQ86TD4 932 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms