RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 BIRC3Q13489 604 aa16.31■□□□□ 0.2
SYNRG-217ENST00000612223 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
SYNRG-217ENST00000612223 ZBED4O75132 1171 aa16.31■□□□□ 0.2
SYNRG-217ENST00000612223 KRT5P13647 590 aa16.31■□□□□ 0.2
SYNRG-217ENST00000612223 KIF2AO00139 706 aaPredicted RBP16.31■□□□□ 0.2
SYNRG-217ENST00000612223 PTGS1P23219 599 aa16.31■□□□□ 0.2
SYNRG-217ENST00000612223 FNBP1Q96RU3 617 aa16.31■□□□□ 0.2
SYNRG-217ENST00000612223 ZBTB24O43167 697 aaPredicted RBP16.3■□□□□ 0.2
SYNRG-217ENST00000612223 GNA11P29992 359 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 HOOK2Q96ED9 719 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 PPIP5K2O43314 1243 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 CCDC175P0C221 793 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 CALML3P27482 149 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 DDX17Q92841 729 aaKnown RBP16.3■□□□□ 0.2
SYNRG-217ENST00000612223 HAUS7Q99871 368 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 SNX16P57768 344 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 RNMTO43148 476 aaKnown RBP16.3■□□□□ 0.2
SYNRG-217ENST00000612223 KCNA6P17658 529 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 KMT5BQ4FZB7 885 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 MAK16Q9BXY0 300 aaKnown RBP16.3■□□□□ 0.2
SYNRG-217ENST00000612223 PSMA7O14818 248 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 ODF2LQ9ULJ1 636 aa16.3■□□□□ 0.2
SYNRG-217ENST00000612223 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 PDE6BP35913 854 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 MBD4O95243 580 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 SLU7O95391 586 aaKnown RBP16.29■□□□□ 0.2
SYNRG-217ENST00000612223 RASA3Q14644 834 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 SLC8A3P57103 927 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 ZSCAN16Q9H4T2 348 aaPredicted RBP16.29■□□□□ 0.2
SYNRG-217ENST00000612223 ZSWIM4Q9H7M6 989 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 C11orf95C9JLR9 678 aaPredicted RBP16.29■□□□□ 0.2
SYNRG-217ENST00000612223 ITGA6P23229 1130 aa16.29■□□□□ 0.2
SYNRG-217ENST00000612223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.29■□□□□ 0.2
SYNRG-217ENST00000612223 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
SYNRG-217ENST00000612223 DCAF17Q5H9S7 520 aaPredicted RBP16.28■□□□□ 0.2
SYNRG-217ENST00000612223 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
SYNRG-217ENST00000612223 C8orf58Q8NAV2 365 aa16.28■□□□□ 0.2
SYNRG-217ENST00000612223 GOLGA1Q92805 767 aa16.28■□□□□ 0.2
SYNRG-217ENST00000612223 CSADQ9Y600 493 aa16.28■□□□□ 0.2
SYNRG-217ENST00000612223 LETM2Q2VYF4 491 aa16.28■□□□□ 0.2
SYNRG-217ENST00000612223 FAM169AQ9Y6X4 670 aa16.28■□□□□ 0.2
SYNRG-217ENST00000612223 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 KRT9P35527 623 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 DLGAP5Q15398 846 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 AZI2Q9H6S1 392 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 ASXL2Q76L83 1435 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 STRN3Q13033 797 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 CCDC155Q8N6L0 562 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 MAST3O60307 1309 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 WDR44Q5JSH3 913 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 SELENOOQ9BVL4 669 aa16.27■□□□□ 0.2
SYNRG-217ENST00000612223 BICC1Q9H694 974 aaKnown RBP16.27■□□□□ 0.2
SYNRG-217ENST00000612223 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 UBASH3AP57075 661 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 CBX1P83916 185 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 USH1GQ495M9 461 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 UIMC1Q96RL1 719 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 ATP8B2P98198 1209 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 NSMFQ6X4W1 530 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 IFT74Q96LB3 600 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 SPC25Q9HBM1 224 aa16.27■□□□□ 0.19
SYNRG-217ENST00000612223 APOBRQ0VD83 1088 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 DTHD1Q6ZMT9 781 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 DDX12PQ92771 950 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 RBM27Q9P2N5 1060 aaKnown RBP16.26■□□□□ 0.19
SYNRG-217ENST00000612223 CEP135Q66GS9 1140 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
SYNRG-217ENST00000612223 HOXC9P31274 260 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 MXRA7P84157 204 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 PARP10Q53GL7 1025 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 GAS8O95995 478 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 CYLC1P35663 651 aaPredicted RBP16.26■□□□□ 0.19
SYNRG-217ENST00000612223 TRPC3Q13507 836 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
SYNRG-217ENST00000612223 RASAL2Q9UJF2 1139 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 PSMC4P43686 418 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 GABPAQ06546 454 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 TXNDC16Q9P2K2 825 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 GSDMDP57764 484 aa16.26■□□□□ 0.19
SYNRG-217ENST00000612223 TAF5LO75529 589 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 CKAP4Q07065 602 aaKnown RBP16.25■□□□□ 0.19
SYNRG-217ENST00000612223 ARMT1Q9H993 441 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 RAPGEF1Q13905 1077 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 GADL1Q6ZQY3 521 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 LINS1Q8NG48 757 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 AATFQ9NY61 560 aaKnown RBP eCLIP16.25■□□□□ 0.19
SYNRG-217ENST00000612223 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 ANO3Q9BYT9 981 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 KIFC2Q96AC6 838 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 DISP3Q9P2K9 1392 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 SDSP20132 328 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 ALDH1B1P30837 517 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 SMTNP53814 917 aa16.25■□□□□ 0.19
SYNRG-217ENST00000612223 KCNG4Q8TDN1 519 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms