RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 TMX1Q9H3N1 280 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 KIAA0754O94854 1291 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 NLRP3Q96P20 1036 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 MYO1BO43795 1136 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 PDE4BQ07343 736 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 HSP90AA4PQ58FG1 418 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 MIGA1Q8NAN2 632 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 KAT14Q9H8E8 782 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 PAG1Q9NWQ8 432 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 ARHGEF12Q9NZN5 1544 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 BAG3O95817 575 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 SLF2Q8IX21 1173 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 CUL5Q93034 780 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 DCAF5Q96JK2 942 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 PYM1Q9BRP8 204 aaKnown RBP10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 SPA17Q15506 151 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 LRRC23Q53EV4 343 aaPredicted RBP10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZBTB41Q5SVQ8 909 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZGPATQ8N5A5 531 aaKnown RBP10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 CRCPO75575 148 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 IDEP14735 1019 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 WHAMMQ8TF30 809 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 EPSTI1Q96J88 318 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 SHTN1A0MZ66 631 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 TIMM10P62072 90 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 GSDMBQ8TAX9 411 aa10.75□□□□□ -0.69
SRGAP2B-204ENST00000612199 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 IRS4O14654 1257 aaPredicted RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 TOM1O60784 492 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 ABL1P00519 1130 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 WTAPQ15007 396 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 AKNAD1Q5T1N1 836 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 HDAC9Q9UKV0 1011 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 FGFR1OPO95684 399 aaKnown RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCDC178Q5BJE1 867 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 FBXW10Q5XX13 1052 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 NFKBIL1Q9UBC1 381 aaPredicted RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 KIF5BP33176 963 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 TMEM266Q2M3C6 531 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 PSPC1Q8WXF1 523 aaKnown RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZBTB43O43298 467 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 KANK3Q6NY19 840 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCDC12Q8WUD4 166 aaPredicted RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 TTC41PQ6P2S7 1318 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 RXRAP19793 462 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 DNM1Q05193 864 aaKnown RBP10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZNF790Q6PG37 636 aa10.74□□□□□ -0.69
SRGAP2B-204ENST00000612199 ADCY5O95622 1261 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 PICALMQ13492 652 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 NCBP1Q09161 790 aaKnown RBP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 HSP90AA5PQ58FG0 334 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 TSG101Q99816 390 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 CRNKL1Q9BZJ0 848 aaKnown RBP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 ATP7AQ04656 1500 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 URI1O94763 535 aaPredicted RBP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 KIF4BQ2VIQ3 1234 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZSCAN23Q3MJ62 389 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCDC63Q8NA47 563 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZFYVE9O95405 1425 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 MARCKSP29966 332 aaPredicted RBP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 AK2P54819 239 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 NAA16Q6N069 864 aaPredicted RBP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 MICALL1Q8N3F8 863 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 C16orf45Q96MC5 204 aaPredicted RBP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 ALG1Q9BT22 464 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 NSFL1CQ9UNZ2 370 aaKnown RBP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 MAP7D1Q3KQU3 841 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 VPS36Q86VN1 386 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 NDUFB9Q9Y6M9 179 aa10.73□□□□□ -0.69
SRGAP2B-204ENST00000612199 CNGA1P29973 690 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 SPDYE2BA6NHP3 402 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 SPDYE6P0CI01 402 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 RASA3Q14644 834 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCT6BQ92526 530 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCDC102AQ96A19 550 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 CRACR2AQ9BSW2 395 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 SLC7A5P2Q9GIP4 190 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 YEATS4O95619 227 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 A1BGP04217 495 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 CHMLP26374 656 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 ST5P78524 1137 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 BMP15O95972 392 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 TMTC2Q8N394 836 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 RNF34Q969K3 372 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 MAGI3Q5TCQ9 1506 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 OPA1O60313 960 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 POLD1P28340 1107 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 UBA7P41226 1012 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 APOBRQ0VD83 1088 aa10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZNF513Q8N8E2 541 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms