RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 SH3TC1Q8TE82 1336 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 TCERG1O14776 1098 aaKnown RBP9.33□□□□□ -0.92
CLK4-214ENST00000611575 SLC10A3P09131 477 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 HCLS1P14317 486 aaPredicted RBP9.33□□□□□ -0.92
CLK4-214ENST00000611575 RPS12P25398 132 aaKnown RBP9.33□□□□□ -0.92
CLK4-214ENST00000611575 CLCN1P35523 988 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 HUNKP57058 714 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 GRM1Q13255 1194 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 DGKZQ13574 1117 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 HSP90AB3PQ58FF7 597 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 RGMBQ6NW40 437 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 ISCA1Q9BUE6 129 aa9.33□□□□□ -0.92
CLK4-214ENST00000611575 PSMD14O00487 310 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 ANXA1P04083 346 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 OATP04181 439 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 PRSS12P56730 875 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 TRIM28Q13263 835 aaKnown RBP9.32□□□□□ -0.92
CLK4-214ENST00000611575 COPS6Q7L5N1 327 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 USP48Q86UV5 1035 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 GOPCQ9HD26 462 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 GPCPD1Q9NPB8 672 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 RNF186Q9NXI6 227 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 POLLQ9UGP5 575 aa9.32□□□□□ -0.92
CLK4-214ENST00000611575 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 H7C1D1 291 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 CHL1O00533 1208 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 VIL1P09327 827 aaKnown RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 ZNF280AP59817 542 aaPredicted RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 KIF23Q02241 960 aaPredicted RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 CNGB1Q14028 1251 aaPredicted RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 DDX46Q7L014 1031 aaKnown RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 KRT26Q7Z3Y9 468 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 CELF1Q92879 486 aaKnown RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 CSRNP1Q96S65 589 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 GMLQ99445 158 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 TMX4Q9H1E5 349 aaPredicted RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 GBA2Q9HCG7 927 aaPredicted RBP9.31□□□□□ -0.92
CLK4-214ENST00000611575 KCNQ5Q9NR82 932 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 TSPYL4Q9UJ04 414 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 VPS9D1Q9Y2B5 631 aa9.31□□□□□ -0.92
CLK4-214ENST00000611575 ADM5C9JUS6 153 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 HOXB7P09629 217 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 COL9A1P20849 921 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 GPSM2P81274 684 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 WASHC4Q2M389 1173 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 NOM1Q5C9Z4 860 aaKnown RBP9.3□□□□□ -0.92
CLK4-214ENST00000611575 TBC1D16Q8TBP0 767 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 NECTIN2Q92692 538 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
CLK4-214ENST00000611575 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
CLK4-214ENST00000611575 CENPFP49454 3210 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 FKBP1BP68106 108 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 TBC1D10BQ4KMP7 808 aaPredicted RBP9.29□□□□□ -0.92
CLK4-214ENST00000611575 PRPF38BQ5VTL8 546 aaKnown RBP9.29□□□□□ -0.92
CLK4-214ENST00000611575 RASAL3Q86YV0 1011 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 PLBD2Q8NHP8 589 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 CFHR5Q9BXR6 569 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 DBNDD1Q9H9R9 158 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 FAM198AQ9UFP1 575 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 ASTN2O75129 1339 aaPredicted RBP9.29□□□□□ -0.92
CLK4-214ENST00000611575 PITPNM2Q9BZ72 1349 aa9.29□□□□□ -0.92
CLK4-214ENST00000611575 ECE2O60344 883 aa9.28□□□□□ -0.92
CLK4-214ENST00000611575 EIF2S2P20042 333 aaKnown RBP9.28□□□□□ -0.92
CLK4-214ENST00000611575 TMPOP42166 694 aaKnown RBP9.28□□□□□ -0.92
CLK4-214ENST00000611575 KRT24Q2M2I5 525 aa9.28□□□□□ -0.92
CLK4-214ENST00000611575 KIF4BQ2VIQ3 1234 aa9.28□□□□□ -0.92
CLK4-214ENST00000611575 CTU1Q7Z7A3 348 aaKnown RBP9.28□□□□□ -0.92
CLK4-214ENST00000611575 C2orf69Q8N8R5 385 aa9.28□□□□□ -0.92
CLK4-214ENST00000611575 CDCA5Q96FF9 252 aa9.28□□□□□ -0.92
CLK4-214ENST00000611575 PNNQ9H307 717 aaKnown RBP9.28□□□□□ -0.92
CLK4-214ENST00000611575 CASP8AP2Q9UKL3 1982 aa9.28□□□□□ -0.92
CLK4-214ENST00000611575 PAPPA2Q9BXP8 1791 aa9.27□□□□□ -0.92
CLK4-214ENST00000611575 SCN9AQ15858 1988 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 PPP1R3GB7ZBB8 358 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 TRPA1O75762 1119 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 NEFMP07197 916 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
CLK4-214ENST00000611575 ZNF157P51786 506 aaPredicted RBP9.27□□□□□ -0.93
CLK4-214ENST00000611575 RIPK4P57078 832 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 AGBL3Q8NEM8 1001 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 NLRP7Q8WX94 980 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 DCPSQ96C86 337 aaKnown RBP9.27□□□□□ -0.93
CLK4-214ENST00000611575 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
CLK4-214ENST00000611575 FAM89AQ96GI7 184 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
CLK4-214ENST00000611575 GGA3Q9NZ52 723 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 HCSTQ9UBK5 93 aa9.27□□□□□ -0.93
CLK4-214ENST00000611575 NSFL1CQ9UNZ2 370 aaKnown RBP9.27□□□□□ -0.93
CLK4-214ENST00000611575 SOX10P56693 466 aa9.26□□□□□ -0.93
CLK4-214ENST00000611575 RPS8P62241 208 aaKnown RBP9.26□□□□□ -0.93
CLK4-214ENST00000611575 PKN2Q16513 984 aaKnown RBP9.26□□□□□ -0.93
CLK4-214ENST00000611575 EYA3Q99504 573 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms