RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SOX13Q9UN79 622 aa6.66□□□□□ -1.34
RNU6-88P-201ENST00000606801 SPDYE3A6NKU9 549 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 SMNDC1O75940 238 aaKnown RBP eCLIP6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 USP17L7P0C7H9 530 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 EIF4BP23588 611 aaKnown RBP6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 FCGRTP55899 365 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 VN1R5Q7Z5H4 357 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 SRCIN1Q9C0H9 1055 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 RBSNQ9H1K0 784 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 JPH1Q9HDC5 661 aaPredicted RBP6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 IGSF5Q9NSI5 407 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 FAM8A1Q9UBU6 413 aa6.65□□□□□ -1.34
RNU6-88P-201ENST00000606801 TM4SF5O14894 197 aa6.64□□□□□ -1.35
RNU6-88P-201ENST00000606801 MEI1Q5TIA1 1274 aa6.64□□□□□ -1.35
RNU6-88P-201ENST00000606801 GDF6Q6KF10 455 aaPredicted RBP6.64□□□□□ -1.35
RNU6-88P-201ENST00000606801 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
RNU6-88P-201ENST00000606801 TRAK1Q9UPV9 953 aa6.64□□□□□ -1.35
RNU6-88P-201ENST00000606801 MSTNO14793 375 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 SPATA31C1P0DKV0 1188 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 EPHA1P21709 976 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 FAAP100Q0VG06 881 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 ZNF423Q2M1K9 1284 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 HGSNATQ68CP4 663 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 USP31Q70CQ4 1352 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 BSNDQ8WZ55 320 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 ZNF576Q9H609 170 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 VTI1BQ9UEU0 232 aa6.63□□□□□ -1.35
RNU6-88P-201ENST00000606801 C1QTNF9BB2RNN3 333 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 E9PSI1 815 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 PROCP04070 461 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 PTPRAP18433 802 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 PTPN12Q05209 780 aaKnown RBP6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 PRRT3Q5FWE3 981 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 IL22RA1Q8N6P7 574 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 SPOCK3Q9BQ16 436 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 MRS2Q9HD23 443 aa6.62□□□□□ -1.35
RNU6-88P-201ENST00000606801 SOX1O00570 391 aaPredicted RBP6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 CDC27P30260 824 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 GSTT1P30711 240 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 CHRNA4P43681 627 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 TRIM28Q13263 835 aaKnown RBP6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 TRAPPC3LQ5T215 181 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 MSL1Q68DK7 614 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 CD163Q86VB7 1156 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 ANKRD24Q8TF21 1146 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 PPP4R2Q9NY27 417 aa6.61□□□□□ -1.35
RNU6-88P-201ENST00000606801 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 ESRRAP11474 423 aaPredicted RBP6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 DTHD1Q6ZMT9 781 aa6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 TMEM87AQ8NBN3 555 aa6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 CRELD1Q96HD1 420 aa6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 SEC31BQ9NQW1 1179 aa6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 AKAP2Q9Y2D5 859 aa6.6□□□□□ -1.35
RNU6-88P-201ENST00000606801 A0A0A0MRY4 1105 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 LINC01387J3KSC0 135 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 FBXO24O75426 580 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 CDC25BP30305 580 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 PCDH1Q08174 1060 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 TAF1CQ15572 869 aaPredicted RBP6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 DMRTC2Q8IXT2 367 aaPredicted RBP6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 CACTIN-AS1Q8N1I8 211 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 CLEC4MQ9H2X3 399 aaPredicted RBP6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 PPME1Q9Y570 386 aa6.59□□□□□ -1.35
RNU6-88P-201ENST00000606801 DEAF1O75398 565 aaPredicted RBP6.58□□□□□ -1.36
RNU6-88P-201ENST00000606801 ZNF157P51786 506 aaPredicted RBP6.58□□□□□ -1.36
RNU6-88P-201ENST00000606801 FANCCQ00597 558 aa6.58□□□□□ -1.36
RNU6-88P-201ENST00000606801 SETDB1Q15047 1291 aa6.58□□□□□ -1.36
RNU6-88P-201ENST00000606801 METTL16Q86W50 562 aaKnown RBP6.58□□□□□ -1.36
RNU6-88P-201ENST00000606801 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
RNU6-88P-201ENST00000606801 NECAB3Q96P71 396 aaPredicted RBP6.58□□□□□ -1.36
RNU6-88P-201ENST00000606801 H3BRJ5 948 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 ENC1O14682 589 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 APBA3O96018 575 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 B3GALT4O96024 378 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 ST13P50502 369 aaKnown RBP6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 HDLBPQ00341 1268 aaKnown RBP6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 GRIK4Q16099 956 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 TPTE2Q6XPS3 522 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 WFDC8Q8IUA0 241 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 STK35Q8TDR2 534 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 TRIM56Q9BRZ2 755 aaKnown RBP6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 PPM1HQ9ULR3 514 aa6.57□□□□□ -1.36
RNU6-88P-201ENST00000606801 PAGE1O75459 146 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 CELA3AP09093 270 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 ELNP15502 786 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 RAC1P63000 192 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 IKBKEQ14164 716 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 RASIP1Q5U651 963 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 C9orf131Q5VYM1 1079 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 FMR1NBQ8N0W7 255 aaPredicted RBP6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 DTWD1Q8N5C7 304 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 KLHDC7BQ96G42 594 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 NRSN2Q9GZP1 204 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 KCNK4Q9NYG8 393 aa6.56□□□□□ -1.36
RNU6-88P-201ENST00000606801 TTF2Q9UNY4 1162 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms