RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CNTNAP4Q9C0A0 1308 aa23.46■■□□□ 1.35
MMP28-201ENST00000605424 GPAA1O43292 621 aa23.46■■□□□ 1.35
MMP28-201ENST00000605424 FGAP02671 866 aa23.46■■□□□ 1.35
MMP28-201ENST00000605424 CCDC173Q0VFZ6 552 aa23.46■■□□□ 1.35
MMP28-201ENST00000605424 PI16Q6UXB8 463 aa23.46■■□□□ 1.35
MMP28-201ENST00000605424 KIF3AQ9Y496 699 aa23.46■■□□□ 1.35
MMP28-201ENST00000605424 SYCE3A1L190 88 aa23.45■■□□□ 1.35
MMP28-201ENST00000605424 FOXP2O15409 715 aa23.45■■□□□ 1.35
MMP28-201ENST00000605424 RXRBP28702 533 aa23.45■■□□□ 1.35
MMP28-201ENST00000605424 PHKA1P46020 1223 aa23.45■■□□□ 1.35
MMP28-201ENST00000605424 EVCP57679 992 aa23.45■■□□□ 1.35
MMP28-201ENST00000605424 KRT85P78386 507 aa23.45■■□□□ 1.35
MMP28-201ENST00000605424 HMGN5P82970 282 aaKnown RBP23.45■■□□□ 1.35
MMP28-201ENST00000605424 DNM1Q05193 864 aaKnown RBP23.45■■□□□ 1.35
MMP28-201ENST00000605424 SLC9C2Q5TAH2 1124 aa23.45■■□□□ 1.35
MMP28-201ENST00000605424 ELP1O95163 1332 aa23.44■■□□□ 1.34
MMP28-201ENST00000605424 WDR19Q8NEZ3 1342 aa23.44■■□□□ 1.34
MMP28-201ENST00000605424 SCRN1Q12765 414 aa23.44■■□□□ 1.34
MMP28-201ENST00000605424 CDC37L1Q7L3B6 337 aa23.44■■□□□ 1.34
MMP28-201ENST00000605424 PPP1R9BQ96SB3 815 aa23.44■■□□□ 1.34
MMP28-201ENST00000605424 BRWD3Q6RI45 1802 aa23.44■■□□□ 1.34
MMP28-201ENST00000605424 FIBPO43427 364 aa23.43■■□□□ 1.34
MMP28-201ENST00000605424 CCDC183Q5T5S1 534 aa23.43■■□□□ 1.34
MMP28-201ENST00000605424 TTLL5Q6EMB2 1281 aa23.43■■□□□ 1.34
MMP28-201ENST00000605424 FAM177BA6PVY3 158 aa23.43■■□□□ 1.34
MMP28-201ENST00000605424 RC3H1Q5TC82 1133 aaKnown RBP23.43■■□□□ 1.34
MMP28-201ENST00000605424 LINC00116Q8NCU8 138 aa23.43■■□□□ 1.34
MMP28-201ENST00000605424 CDC5LQ99459 802 aaKnown RBP23.43■■□□□ 1.34
MMP28-201ENST00000605424 RBSNQ9H1K0 784 aa23.43■■□□□ 1.34
MMP28-201ENST00000605424 PIH1D3Q9NQM4 214 aaKnown RBP23.43■■□□□ 1.34
MMP28-201ENST00000605424 SEC31BQ9NQW1 1179 aa23.43■■□□□ 1.34
MMP28-201ENST00000605424 ZNF213O14771 459 aa23.42■■□□□ 1.34
MMP28-201ENST00000605424 SPATA5Q8NB90 893 aa23.42■■□□□ 1.34
MMP28-201ENST00000605424 LRRC2Q9BYS8 371 aa23.42■■□□□ 1.34
MMP28-201ENST00000605424 SCAND2PQ9GZW5 306 aaPredicted RBP23.42■■□□□ 1.34
MMP28-201ENST00000605424 ZSCAN16Q9H4T2 348 aaPredicted RBP23.42■■□□□ 1.34
MMP28-201ENST00000605424 MCM5P33992 734 aa23.41■■□□□ 1.34
MMP28-201ENST00000605424 FAM184AQ8NB25 1140 aa23.41■■□□□ 1.34
MMP28-201ENST00000605424 HELBQ8NG08 1087 aaPredicted RBP23.41■■□□□ 1.34
MMP28-201ENST00000605424 NCOA7Q8NI08 942 aa23.41■■□□□ 1.34
MMP28-201ENST00000605424 IDH1O75874 414 aaKnown RBP23.41■■□□□ 1.34
MMP28-201ENST00000605424 APOBRQ0VD83 1088 aa23.41■■□□□ 1.34
MMP28-201ENST00000605424 NSUN7Q8NE18 718 aaKnown RBP23.41■■□□□ 1.34
MMP28-201ENST00000605424 A0A0G2JLW4 131 aa23.4■■□□□ 1.34
MMP28-201ENST00000605424 JAK2O60674 1132 aa23.4■■□□□ 1.34
MMP28-201ENST00000605424 PDE6AP16499 860 aa23.4■■□□□ 1.34
MMP28-201ENST00000605424 MAP3K12Q12852 859 aa23.4■■□□□ 1.34
MMP28-201ENST00000605424 SF3B3Q15393 1217 aaKnown RBP23.4■■□□□ 1.34
MMP28-201ENST00000605424 TSPY26PQ9H489 355 aa23.4■■□□□ 1.34
MMP28-201ENST00000605424 ZMYM6O95789 1325 aa23.4■■□□□ 1.34
MMP28-201ENST00000605424 ZNF532Q9HCE3 1301 aa23.4■■□□□ 1.34
MMP28-201ENST00000605424 TCRBV5S4A2TA0A5A2 114 aa23.39■■□□□ 1.34
MMP28-201ENST00000605424 PDIA3P30101 505 aaKnown RBP23.39■■□□□ 1.34
MMP28-201ENST00000605424 NAA16Q6N069 864 aaPredicted RBP23.39■■□□□ 1.34
MMP28-201ENST00000605424 MB21D2Q8IYB1 491 aaPredicted RBP23.39■■□□□ 1.34
MMP28-201ENST00000605424 ALX1Q15699 326 aa23.39■■□□□ 1.33
MMP28-201ENST00000605424 TRIM44Q96DX7 344 aaPredicted RBP23.39■■□□□ 1.33
MMP28-201ENST00000605424 DOCK2Q92608 1830 aa23.38■■□□□ 1.33
MMP28-201ENST00000605424 H3BQV1 296 aa23.38■■□□□ 1.33
MMP28-201ENST00000605424 IFFO2Q5TF58 517 aa23.38■■□□□ 1.33
MMP28-201ENST00000605424 RALYLQ86SE5 291 aaKnown RBP23.38■■□□□ 1.33
MMP28-201ENST00000605424 RASGRF1Q13972 1273 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 SLC10A5Q5PT55 438 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 PTF1AQ7RTS3 328 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 DHX16O60231 1041 aaKnown RBP23.37■■□□□ 1.33
MMP28-201ENST00000605424 DTNBO60941 627 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 CHRNDQ07001 517 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 TRDNQ13061 729 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 FERMT3Q86UX7 667 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 SALL1Q9NSC2 1324 aa23.37■■□□□ 1.33
MMP28-201ENST00000605424 SCN7AQ01118 1682 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 PTPDC1A2A3K4 754 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 PRC1O43663 620 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 RPS6KA4O75676 772 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 CTDNEP1O95476 244 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 HAND2P61296 217 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 RESTQ13127 1097 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 AIDAQ96BJ3 306 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 STRBPQ96SI9 672 aaKnown RBP23.36■■□□□ 1.33
MMP28-201ENST00000605424 WWC3Q9ULE0 1092 aa23.36■■□□□ 1.33
MMP28-201ENST00000605424 ANKRD18AQ8IVF6 992 aa23.35■■□□□ 1.33
MMP28-201ENST00000605424 NYXQ9GZU5 481 aa23.35■■□□□ 1.33
MMP28-201ENST00000605424 NARFQ9UHQ1 456 aa23.35■■□□□ 1.33
MMP28-201ENST00000605424 TTC6Q86TZ1 520 aa23.35■■□□□ 1.33
MMP28-201ENST00000605424 NHSQ6T4R5 1651 aa23.34■■□□□ 1.33
MMP28-201ENST00000605424 PATL2C9JE40 543 aaKnown RBP23.34■■□□□ 1.33
MMP28-201ENST00000605424 ERFEQ4G0M1 354 aa23.34■■□□□ 1.33
MMP28-201ENST00000605424 ATL3Q6DD88 541 aa23.34■■□□□ 1.33
MMP28-201ENST00000605424 KRT27Q7Z3Y8 459 aa23.34■■□□□ 1.33
MMP28-201ENST00000605424 DDX11Q96FC9 970 aa23.34■■□□□ 1.33
MMP28-201ENST00000605424 RTN4Q9NQC3 1192 aaKnown RBP23.34■■□□□ 1.33
MMP28-201ENST00000605424 BSDC1Q9NW68 430 aaPredicted RBP23.34■■□□□ 1.33
MMP28-201ENST00000605424 CFAP45Q9UL16 551 aa23.34■■□□□ 1.33
MMP28-201ENST00000605424 MYO5AQ9Y4I1 1855 aaKnown RBP23.34■■□□□ 1.33
MMP28-201ENST00000605424 GNAT2P19087 354 aa23.33■■□□□ 1.33
MMP28-201ENST00000605424 UBE4AQ14139 1066 aa23.33■■□□□ 1.33
MMP28-201ENST00000605424 CHST3Q7LGC8 479 aa23.33■■□□□ 1.33
MMP28-201ENST00000605424 RGS22Q8NE09 1264 aa23.33■■□□□ 1.33
MMP28-201ENST00000605424 CCT2P78371 535 aaKnown RBP23.33■■□□□ 1.32
MMP28-201ENST00000605424 SPATA32Q96LK8 384 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms