RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PRKAG2Q9UGJ0 569 aa6.79□□□□□ -1.32
COL4A3BP-207ENST00000604926 TMEM98Q9Y2Y6 226 aa6.79□□□□□ -1.32
COL4A3BP-207ENST00000604926 USP32Q8NFA0 1604 aa6.79□□□□□ -1.32
COL4A3BP-207ENST00000604926 RAD50Q92878 1312 aa6.79□□□□□ -1.32
COL4A3BP-207ENST00000604926 KIF1AQ12756 1690 aa6.79□□□□□ -1.32
COL4A3BP-207ENST00000604926 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 A0A1W2PRQ8 180 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 GRXCR2A6NFK2 248 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 FGFR1OPO95684 399 aaKnown RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 RPN1P04843 607 aaKnown RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 HSP90AB1P08238 724 aaKnown RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 TSPY4P0CV99 314 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 TSPY10P0CW01 314 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 GJA8P48165 433 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 TMED1Q13445 227 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 SART3Q15020 963 aaKnown RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 ATP2B3Q16720 1220 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 RABL6Q3YEC7 729 aaPredicted RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 PARP10Q53GL7 1025 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 USP33Q8TEY7 942 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 CWC15Q9P013 229 aaKnown RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 C6orf203Q9P0P8 240 aaPredicted RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 SPATA7Q9P0W8 599 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 DCCP43146 1447 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 UQCRHLA0A096LP55 91 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 B3GALNT1O75752 331 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 UQCRHP07919 91 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 COL6A1P12109 1028 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 NFX1Q12986 1120 aaKnown RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 NAIF1Q69YI7 327 aaPredicted RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 PACS1Q6VY07 963 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 DCLK2Q8N568 766 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 IPCEF1Q8WWN9 437 aaPredicted RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 TSC1Q92574 1164 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 HPS3Q969F9 1004 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 VPS33BQ9H267 617 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 RASSF4Q9H2L5 321 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 CFAP45Q9UL16 551 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 MST1RQ04912 1400 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 CEP162Q5TB80 1403 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 CASKIN1Q8WXD9 1431 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 ERBB4Q15303 1308 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 TNFRSF10BO14763 440 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 TBX3O15119 743 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 MSL3P1P0C860 447 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 MAP2K2P36507 400 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 BIRC3Q13489 604 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 DCTN1Q14203 1278 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 ESCO1Q5FWF5 840 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 ZNF713Q8N859 430 aaPredicted RBP6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 SH3TC2Q8TF17 1288 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 GLMNQ92990 594 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 RBSNQ9H1K0 784 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 RABGAP1Q9Y3P9 1069 aa6.78□□□□□ -1.32
COL4A3BP-207ENST00000604926 INMTO95050 263 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 EIF2B5Q13144 721 aaKnown RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 UROC1Q96N76 676 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 PLEKHG4BQ96PX9 1271 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 DNAJC25Q9H1X3 360 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 FMNL1O95466 1100 aaPredicted RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 CCDC159P0C7I6 412 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 HSD17B7P56937 341 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 SRPK2P78362 688 aaKnown RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 RC3H1Q5TC82 1133 aaKnown RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 NEK10Q6ZWH5 1172 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 CCDC26Q8TAB7 109 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 BAG1Q99933 345 aaPredicted RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 DEF6Q9H4E7 631 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 VRTNQ9H8Y1 702 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 ADGRL2O95490 1459 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 ABCC6O95255 1503 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 PDGFRBP09619 1106 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 BPIFB3P59826 476 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 RNPC3Q96LT9 517 aaKnown RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 GSDMAQ96QA5 445 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 OSBPL5Q9H0X9 879 aaPredicted RBP6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 EXOC1Q9NV70 894 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 CLIP2Q9UDT6 1046 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 JRKLQ9Y4A0 524 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 LRRC7Q96NW7 1537 aa6.77□□□□□ -1.33
COL4A3BP-207ENST00000604926 A0A0B4J203 849 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 RPL17P18621 184 aaKnown RBP6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 TRAPPC10P48553 1259 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 SNX16P57768 344 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 RNF187Q5TA31 235 aaPredicted RBP6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 FIP1L1Q6UN15 594 aaKnown RBP6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 CCDC65Q8IXS2 484 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 LILRB2Q8N423 598 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 ARL6IP6Q8N6S5 226 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 WDR66Q8TBY9 1149 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 RMDN2Q96LZ7 410 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 CUEDC1Q9NWM3 386 aaPredicted RBP6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 XPO7Q9UIA9 1087 aaKnown RBP6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 FMN1Q68DA7 1419 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 TMEM88BA6NKF7 163 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 VAMP4O75379 141 aa6.76□□□□□ -1.33
COL4A3BP-207ENST00000604926 TAS1R3Q7RTX0 852 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms