RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
FGFR2-222ENST00000604236 CBX1P83916 185 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 CBX8Q9HC52 389 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 PGBD1Q96JS3 809 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 HAUS7Q99871 368 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 CLIC4Q9Y696 253 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
FGFR2-222ENST00000604236 AP5Z1O43299 807 aa17.98■□□□□ 0.47
FGFR2-222ENST00000604236 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
FGFR2-222ENST00000604236 NOLC1Q14978 699 aaKnown RBP eCLIP17.98■□□□□ 0.47
FGFR2-222ENST00000604236 TCHHQ07283 1943 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 CCDC69A6NI79 296 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 CDK11BP21127 795 aaKnown RBP17.97■□□□□ 0.47
FGFR2-222ENST00000604236 ATP2B2Q01814 1243 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 AKAP17AQ02040 695 aaKnown RBP17.97■□□□□ 0.47
FGFR2-222ENST00000604236 DDB1Q16531 1140 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 ZNF827Q17R98 1081 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 SCAND2PQ9GZW5 306 aaPredicted RBP17.97■□□□□ 0.47
FGFR2-222ENST00000604236 SLC4A4Q9Y6R1 1079 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 MEGF6O75095 1541 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 CLEC17AQ6ZS10 378 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 HOMER1Q86YM7 354 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 MRVI1Q9Y6F6 885 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 MCAMP43121 646 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 METAP2P50579 478 aaKnown RBP eCLIP17.97■□□□□ 0.47
FGFR2-222ENST00000604236 ALG1Q9BT22 464 aa17.97■□□□□ 0.47
FGFR2-222ENST00000604236 XRN1Q8IZH2 1706 aaKnown RBP17.96■□□□□ 0.47
FGFR2-222ENST00000604236 GOLGA8AA7E2F4 631 aa17.96■□□□□ 0.47
FGFR2-222ENST00000604236 VAT1LQ9HCJ6 419 aa17.96■□□□□ 0.47
FGFR2-222ENST00000604236 AOX1Q06278 1338 aa17.96■□□□□ 0.47
FGFR2-222ENST00000604236 CYP7A1P22680 504 aa17.96■□□□□ 0.47
FGFR2-222ENST00000604236 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.47
FGFR2-222ENST00000604236 PIH1D3Q9NQM4 214 aaKnown RBP17.96■□□□□ 0.47
FGFR2-222ENST00000604236 RFX5P48382 616 aaPredicted RBP17.95■□□□□ 0.46
FGFR2-222ENST00000604236 ATG3Q9NT62 314 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 SPATA31A3Q5VYP0 1347 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 CCDC191Q8NCU4 936 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 KIF3AQ9Y496 699 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 FAM208AQ9UK61 1670 aaKnown RBP17.95■□□□□ 0.46
FGFR2-222ENST00000604236 LTN1O94822 1766 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 AFMP43652 599 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 CCDC102BQ68D86 513 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 C11orf57Q6ZUT1 292 aaPredicted RBP17.95■□□□□ 0.46
FGFR2-222ENST00000604236 CFAP45Q9UL16 551 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 ZNF609O15014 1411 aa17.95■□□□□ 0.46
FGFR2-222ENST00000604236 ERICH2A1L162 156 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 PDIA3P30101 505 aaKnown RBP17.94■□□□□ 0.46
FGFR2-222ENST00000604236 IGHMBP2P38935 993 aaKnown RBP17.94■□□□□ 0.46
FGFR2-222ENST00000604236 STX17P56962 302 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
FGFR2-222ENST00000604236 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 GOLGA6L6A8MZA4 724 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 MCM5P33992 734 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 AKAP2Q9Y2D5 859 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 MAPK8IP1Q9UQF2 711 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 SLC12A7Q9Y666 1083 aa17.94■□□□□ 0.46
FGFR2-222ENST00000604236 PRKCSHP14314 528 aaPredicted RBP17.93■□□□□ 0.46
FGFR2-222ENST00000604236 COL15A1P39059 1388 aa17.93■□□□□ 0.46
FGFR2-222ENST00000604236 GLIPR1L2Q4G1C9 344 aa17.93■□□□□ 0.46
FGFR2-222ENST00000604236 GRAMD1CQ8IYS0 662 aa17.93■□□□□ 0.46
FGFR2-222ENST00000604236 SERPINC1P01008 464 aa17.93■□□□□ 0.46
FGFR2-222ENST00000604236 CASP1P29466 404 aa17.93■□□□□ 0.46
FGFR2-222ENST00000604236 MTX1Q13505 466 aa17.93■□□□□ 0.46
FGFR2-222ENST00000604236 FAM47AQ5JRC9 791 aa17.93■□□□□ 0.46
FGFR2-222ENST00000604236 NSUN7Q8NE18 718 aaKnown RBP17.93■□□□□ 0.46
FGFR2-222ENST00000604236 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
FGFR2-222ENST00000604236 NOL7Q9UMY1 257 aaKnown RBP17.93■□□□□ 0.46
FGFR2-222ENST00000604236 KDM6AO15550 1401 aaPredicted RBP17.93■□□□□ 0.46
FGFR2-222ENST00000604236 WDR17Q8IZU2 1322 aa17.92■□□□□ 0.46
FGFR2-222ENST00000604236 UBAC1Q9BSL1 405 aa17.92■□□□□ 0.46
FGFR2-222ENST00000604236 ZSWIM4Q9H7M6 989 aa17.92■□□□□ 0.46
FGFR2-222ENST00000604236 H7C1W4 665 aa17.92■□□□□ 0.46
FGFR2-222ENST00000604236 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
FGFR2-222ENST00000604236 HEG1Q9ULI3 1381 aa17.92■□□□□ 0.46
FGFR2-222ENST00000604236 TRMT1LQ7Z2T5 733 aaKnown RBP17.92■□□□□ 0.46
FGFR2-222ENST00000604236 ANKIB1Q9P2G1 1089 aa17.92■□□□□ 0.46
FGFR2-222ENST00000604236 CDC25AP30304 524 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 IARSP41252 1262 aaKnown RBP17.91■□□□□ 0.46
FGFR2-222ENST00000604236 DYNLL1P63167 89 aaKnown RBP17.91■□□□□ 0.46
FGFR2-222ENST00000604236 SUSD4Q5VX71 490 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 TMC6Q7Z403 805 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 TTLL11Q8NHH1 800 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 PPP1R9BQ96SB3 815 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 CACNA1FO60840 1977 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 RGPD2P0DJD1 1756 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 TRMT44Q8IYL2 757 aaKnown RBP17.91■□□□□ 0.46
FGFR2-222ENST00000604236 FAM200AQ8TCP9 573 aa17.91■□□□□ 0.46
FGFR2-222ENST00000604236 ZNF396Q96N95 335 aaPredicted RBP17.9■□□□□ 0.46
FGFR2-222ENST00000604236 GOLPH3LQ9H4A5 285 aa17.9■□□□□ 0.46
FGFR2-222ENST00000604236 NDUFA8P51970 172 aa17.9■□□□□ 0.46
FGFR2-222ENST00000604236 EVX2Q03828 476 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms