RNA–Protein interactions for RNA: ENST00000603717.1

AC008555.3-201, humanhuman

TSL 3 BASIC

Gene AC008555.3, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.3-201ENST00000603717 TLR1Q15399 786 aa7.47□□□□□ -1.21
AC008555.3-201ENST00000603717 TMEM259Q4ZIN3 620 aa7.47□□□□□ -1.21
AC008555.3-201ENST00000603717 ETNK1Q9HBU6 452 aa7.47□□□□□ -1.21
AC008555.3-201ENST00000603717 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
AC008555.3-201ENST00000603717 MARF1Q9Y4F3 1742 aaKnown RBP7.47□□□□□ -1.21
AC008555.3-201ENST00000603717 ANKRD36BQ8N2N9 1353 aa7.46□□□□□ -1.21
AC008555.3-201ENST00000603717 CDC42BPGQ6DT37 1551 aa7.46□□□□□ -1.21
AC008555.3-201ENST00000603717 WNT11O96014 354 aa7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 IGLV1-40P01703 118 aa7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 ESCO1Q5FWF5 840 aa7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 ZDHHC13Q8IUH4 622 aa7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 DMRTC2Q8IXT2 367 aaPredicted RBP7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 GJD4Q96KN9 370 aaPredicted RBP7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 ATP7BP35670 1465 aa7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 PLEKHG1Q9ULL1 1385 aa7.46□□□□□ -1.22
AC008555.3-201ENST00000603717 NSD3Q9BZ95 1437 aa7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 FMN2Q9NZ56 1722 aa7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 AFF1P51825 1210 aaKnown RBP7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 MLECQ14165 292 aa7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 FAM9BQ8IZU0 186 aa7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 PCMTD1Q96MG8 357 aaPredicted RBP7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 SUPT16HQ9Y5B9 1047 aaKnown RBP7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 NSD2O96028 1365 aa7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 METP08581 1390 aa7.45□□□□□ -1.22
AC008555.3-201ENST00000603717 COL3A1P02461 1466 aaPredicted RBP7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 ZNF865P0CJ78 1059 aaPredicted RBP7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 PPP2R1AP30153 589 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 ABI1Q8IZP0 508 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 SIRT1Q96EB6 747 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 CDCA7Q9BWT1 371 aaPredicted RBP7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 GOPCQ9HD26 462 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 NCANO14594 1321 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 RNF123Q5XPI4 1314 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 EVC2Q86UK5 1308 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 POLR3AO14802 1390 aaPredicted RBP7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
AC008555.3-201ENST00000603717 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 DLG5Q8TDM6 1919 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 CC2D1BQ5T0F9 858 aaKnown RBP7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 INTS5Q6P9B9 1019 aaKnown RBP7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 TMC1Q8TDI8 760 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 JPH1Q9HDC5 661 aaPredicted RBP7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 ZDHHC3Q9NYG2 299 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 KNSTRNQ9Y448 316 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 A0A1W2PP64 1363 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 PLEKHH1Q9ULM0 1364 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 CPSF1Q10570 1443 aaKnown RBP7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 PTCH1Q13635 1447 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 PTPRUQ92729 1446 aa7.43□□□□□ -1.22
AC008555.3-201ENST00000603717 DBX1A6NMT0 343 aa7.42□□□□□ -1.22
AC008555.3-201ENST00000603717 SFSWAPQ12872 951 aaKnown RBP7.42□□□□□ -1.22
AC008555.3-201ENST00000603717 NR1H3Q13133 447 aa7.42□□□□□ -1.22
AC008555.3-201ENST00000603717 RAB44Q7Z6P3 723 aaPredicted RBP7.42□□□□□ -1.22
AC008555.3-201ENST00000603717 NWD1Q149M9 1564 aa7.42□□□□□ -1.22
AC008555.3-201ENST00000603717 GSC2O15499 205 aa7.41□□□□□ -1.22
AC008555.3-201ENST00000603717 MCCD1P59942 119 aaPredicted RBP7.41□□□□□ -1.22
AC008555.3-201ENST00000603717 CBLL1Q75N03 491 aa7.41□□□□□ -1.22
AC008555.3-201ENST00000603717 SLC12A5Q9H2X9 1139 aa7.41□□□□□ -1.22
AC008555.3-201ENST00000603717 GJA3Q9Y6H8 435 aa7.41□□□□□ -1.22
AC008555.3-201ENST00000603717 PRRG2O14669 202 aa7.4□□□□□ -1.22
AC008555.3-201ENST00000603717 PTCD1O75127 700 aaKnown RBP7.4□□□□□ -1.22
AC008555.3-201ENST00000603717 NUDT8Q8WV74 236 aa7.4□□□□□ -1.22
AC008555.3-201ENST00000603717 ASIC4Q96FT7 647 aa7.4□□□□□ -1.22
AC008555.3-201ENST00000603717 PRAM1Q96QH2 718 aa7.4□□□□□ -1.22
AC008555.3-201ENST00000603717 ZNF521Q96K83 1311 aa7.4□□□□□ -1.22
AC008555.3-201ENST00000603717 LRRC7Q96NW7 1537 aa7.4□□□□□ -1.22
AC008555.3-201ENST00000603717 RGPD1P0DJD0 1748 aa7.4□□□□□ -1.23
AC008555.3-201ENST00000603717 NKTRP30414 1462 aaKnown RBP7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 ROBO2Q9HCK4 1378 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 PRR19A6NJB7 356 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 LTKP29376 864 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 SPEM2Q0P670 501 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 ZNF124Q15973 351 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 IGF2-ASQ6U949 168 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 DTWD1Q8N5C7 304 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 NUDCQ9Y266 331 aa7.39□□□□□ -1.23
AC008555.3-201ENST00000603717 PIK3C2AO00443 1686 aa7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 SOCS7O14512 581 aa7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 MYCP01106 439 aaPredicted RBP7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 TATP17735 454 aaPredicted RBP7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 ITGB5P18084 799 aa7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 ZNF648Q5T619 568 aaPredicted RBP7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 ZNF592Q92610 1267 aa7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 RAXQ9Y2V3 346 aa7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 ZNF330Q9Y3S2 320 aaPredicted RBP7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 STRCP1A6NGW2 1772 aa7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 PEAK1Q9H792 1746 aa7.38□□□□□ -1.23
AC008555.3-201ENST00000603717 EDC4Q6P2E9 1401 aaKnown RBP7.37□□□□□ -1.23
AC008555.3-201ENST00000603717 PIK3R4Q99570 1358 aa7.37□□□□□ -1.23
AC008555.3-201ENST00000603717 CGNL1Q0VF96 1302 aa7.37□□□□□ -1.23
AC008555.3-201ENST00000603717 GRIK1P39086 918 aa7.37□□□□□ -1.23
AC008555.3-201ENST00000603717 CEBPAP49715 358 aaPredicted RBP7.37□□□□□ -1.23
AC008555.3-201ENST00000603717 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
AC008555.3-201ENST00000603717 STK26Q9P289 416 aa7.37□□□□□ -1.23
AC008555.3-201ENST00000603717 SSH2Q76I76 1423 aa7.36□□□□□ -1.23
AC008555.3-201ENST00000603717 XIRP1Q702N8 1843 aaKnown RBP7.36□□□□□ -1.23
AC008555.3-201ENST00000603717 PNPLA6Q8IY17 1366 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms