RNA–Protein interactions for RNA: ENST00000602351.5

PPFIA3-203, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 5 BASIC

Gene PPFIA3, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-203ENST00000602351 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.33
PPFIA3-203ENST00000602351 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 KRT18P05783 430 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 PATL2C9JE40 543 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 KCNQ2O43526 872 aa17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 TAF5LO75529 589 aa17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 AK2P54819 239 aa17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 UTP14AQ9BVJ6 771 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
PPFIA3-203ENST00000602351 CPA1P15085 419 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 JAKMIP3Q5VZ66 844 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 CTCFLQ8NI51 663 aaPredicted RBP17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 RTL1A6NKG5 1358 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 STX1AQ16623 288 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 CCDC82Q8N4S0 544 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 MKNK2Q9HBH9 465 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 RANBP6O60518 1105 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 CEP131Q9UPN4 1083 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 OVOS2A0A0J9YW53 1432 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 OVOS2Q6IE36 1432 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 CASQ1P31415 396 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 SIK1P57059 783 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 SIRT2Q8IXJ6 389 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 CD163L1Q9NR16 1453 aa17.07■□□□□ 0.32
PPFIA3-203ENST00000602351 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 TTC41PQ6P2S7 1318 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 ZSCAN12O43309 604 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 CAPN2P17655 700 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 GNG11P61952 73 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 DLC1Q96QB1 1528 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 USP31Q70CQ4 1352 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 CBFA2T2O43439 604 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 POLR3DP05423 398 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 PPFIBP1Q86W92 1011 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 NLRP3Q96P20 1036 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 CBX8Q9HC52 389 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 TECPR2O15040 1411 aa17.06■□□□□ 0.32
PPFIA3-203ENST00000602351 CAVIN2O95810 425 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 USP8P40818 1118 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 TRIM37O94972 964 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 ITGA6P23229 1130 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 NAA30Q147X3 362 aaPredicted RBP17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 GOLGA8AA7E2F4 631 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 NEK11Q8NG66 645 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 BRF1Q92994 677 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 ZNF75DP51815 510 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 CCDC152Q4G0S7 254 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
PPFIA3-203ENST00000602351 CTAGE5O15320 804 aa17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 CHMLP26374 656 aa17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 ZNHIT6Q9NWK9 470 aaKnown RBP17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 MNAT1P51948 309 aa17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 ERCC6LQ2NKX8 1250 aa17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 ANKRD18AQ8IVF6 992 aa17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 SYNE4Q8N205 404 aa17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
PPFIA3-203ENST00000602351 TOP1P11387 765 aaKnown RBP17.03■□□□□ 0.32
PPFIA3-203ENST00000602351 AOPEPQ8N6M6 819 aa17.03■□□□□ 0.32
PPFIA3-203ENST00000602351 NRBP1Q9UHY1 535 aa17.03■□□□□ 0.32
PPFIA3-203ENST00000602351 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
PPFIA3-203ENST00000602351 KIAA0754O94854 1291 aa17.03■□□□□ 0.32
PPFIA3-203ENST00000602351 KIF2CQ99661 725 aa17.03■□□□□ 0.32
PPFIA3-203ENST00000602351 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 TERF2Q15554 542 aa17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 CENPHQ9H3R5 247 aa17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 F8W031 263 aaPredicted RBP17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 TRAPPC3LQ5T215 181 aa17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 BMP2KQ9NSY1 1161 aaPredicted RBP17.02■□□□□ 0.32
PPFIA3-203ENST00000602351 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 CCDC129Q6ZRS4 1044 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 ZHX3Q9H4I2 956 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 PALD1Q9ULE6 856 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 SH3TC1Q8TE82 1336 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 A0A1B0GUL7 405 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 PHACTR2O75167 634 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 MICU3Q86XE3 530 aa17.02■□□□□ 0.31
PPFIA3-203ENST00000602351 APBA3O96018 575 aa17.01■□□□□ 0.31
PPFIA3-203ENST00000602351 CRKLP46109 303 aaKnown RBP17.01■□□□□ 0.31
PPFIA3-203ENST00000602351 TTC31Q49AM3 519 aaPredicted RBP17.01■□□□□ 0.31
PPFIA3-203ENST00000602351 ZNF444Q8N0Y2 327 aaPredicted RBP17.01■□□□□ 0.31
PPFIA3-203ENST00000602351 TMOD2Q9NZR1 351 aa17.01■□□□□ 0.31
PPFIA3-203ENST00000602351 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms