RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 ZBTB1Q9Y2K1 713 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 BIN1O00499 593 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 F13A1P00488 732 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 WDR66Q8TBY9 1149 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 TSG101Q99816 390 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 NAPAP54920 295 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 LUC7LQ9NQ29 371 aaKnown RBP16.99■□□□□ 0.31
SYMPK-213ENST00000599460 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 LAMC1P11047 1609 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 ATP5JP18859 108 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 PTPDC1A2A3K4 754 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 B4E1Z4 1266 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 RPS6KB1P23443 525 aa16.99■□□□□ 0.31
SYMPK-213ENST00000599460 KRI1Q8N9T8 703 aaKnown RBP16.99■□□□□ 0.31
SYMPK-213ENST00000599460 ARGLU1Q9NWB6 273 aaPredicted RBP16.99■□□□□ 0.31
SYMPK-213ENST00000599460 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
SYMPK-213ENST00000599460 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
SYMPK-213ENST00000599460 PPP1R12BO60237 982 aaPredicted RBP16.98■□□□□ 0.31
SYMPK-213ENST00000599460 SNX14Q9Y5W7 946 aa16.98■□□□□ 0.31
SYMPK-213ENST00000599460 CCDC102BQ68D86 513 aa16.98■□□□□ 0.31
SYMPK-213ENST00000599460 ALDH1B1P30837 517 aa16.98■□□□□ 0.31
SYMPK-213ENST00000599460 AMPD3Q01432 767 aa16.98■□□□□ 0.31
SYMPK-213ENST00000599460 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
SYMPK-213ENST00000599460 TRIM37O94972 964 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 TRMT1LQ7Z2T5 733 aaKnown RBP16.97■□□□□ 0.31
SYMPK-213ENST00000599460 USP48Q86UV5 1035 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 PIGBQ92521 554 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 RRP36Q96EU6 259 aaKnown RBP16.97■□□□□ 0.31
SYMPK-213ENST00000599460 ZNF532Q9HCE3 1301 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 DNM1Q05193 864 aaKnown RBP16.97■□□□□ 0.31
SYMPK-213ENST00000599460 LRRC24Q50LG9 513 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 PPP4R3AQ6IN85 833 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 SEPT11Q9NVA2 429 aaKnown RBP16.97■□□□□ 0.31
SYMPK-213ENST00000599460 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 KCNG4Q8TDN1 519 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 EAF2Q96CJ1 260 aaPredicted RBP16.97■□□□□ 0.31
SYMPK-213ENST00000599460 GJA3Q9Y6H8 435 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 AGLP35573 1532 aa16.97■□□□□ 0.31
SYMPK-213ENST00000599460 PYM1Q9BRP8 204 aaKnown RBP16.97■□□□□ 0.31
SYMPK-213ENST00000599460 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
SYMPK-213ENST00000599460 TRAF1Q13077 416 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 STX1AQ16623 288 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 FAM177A1Q8N128 213 aaPredicted RBP16.96■□□□□ 0.31
SYMPK-213ENST00000599460 EDC3Q96F86 508 aaKnown RBP16.96■□□□□ 0.31
SYMPK-213ENST00000599460 ZNF772Q68DY9 489 aaPredicted RBP16.96■□□□□ 0.31
SYMPK-213ENST00000599460 GIGYF2Q6Y7W6 1299 aaKnown RBP16.96■□□□□ 0.31
SYMPK-213ENST00000599460 FLAD1Q8NFF5 587 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 SAMM50Q9Y512 469 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 IBTKQ9P2D0 1353 aaPredicted RBP16.96■□□□□ 0.31
SYMPK-213ENST00000599460 HEG1Q9ULI3 1381 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 IDEP14735 1019 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 SCLT1Q96NL6 688 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 BMP15O95972 392 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 PDE6BP35913 854 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 ISM2Q6H9L7 571 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 KANK3Q6NY19 840 aa16.96■□□□□ 0.31
SYMPK-213ENST00000599460 SYKP43405 635 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 KCNQ4P56696 695 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 INTS4Q96HW7 963 aaKnown RBP16.95■□□□□ 0.3
SYMPK-213ENST00000599460 GREM2Q9H772 168 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
SYMPK-213ENST00000599460 MAST3O60307 1309 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 TXLNBQ8N3L3 684 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 CYP27B1O15528 508 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
SYMPK-213ENST00000599460 ARHGEF40Q8TER5 1519 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 FKBP15Q5T1M5 1219 aa16.95■□□□□ 0.3
SYMPK-213ENST00000599460 PIK3C2BO00750 1634 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 NEXMIFQ5QGS0 1516 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 KIF20AO95235 890 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 TNNI2P48788 182 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 RBM28Q9NW13 759 aaKnown RBP16.94■□□□□ 0.3
SYMPK-213ENST00000599460 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
SYMPK-213ENST00000599460 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 GSPT1P15170 499 aaKnown RBP16.94■□□□□ 0.3
SYMPK-213ENST00000599460 KRT2P35908 639 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 KRT27Q7Z3Y8 459 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 RXRBP28702 533 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 CTDSPL2Q05D32 466 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
SYMPK-213ENST00000599460 ZC3H13Q5T200 1668 aaKnown RBP16.93■□□□□ 0.3
SYMPK-213ENST00000599460 PRDM1O75626 825 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 CALML3P27482 149 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 TMEM87BQ96K49 555 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 EPB41L2O43491 1005 aaKnown RBP16.93■□□□□ 0.3
SYMPK-213ENST00000599460 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
SYMPK-213ENST00000599460 PARP1P09874 1014 aaKnown RBP16.93■□□□□ 0.3
SYMPK-213ENST00000599460 IBSPP21815 317 aaPredicted RBP16.93■□□□□ 0.3
SYMPK-213ENST00000599460 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 NF2P35240 595 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 GYG1P46976 350 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 ZSCAN23Q3MJ62 389 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms