RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 SHTN1A0MZ66 631 aa12.73□□□□□ -0.37
TUBD1-215ENST00000593110 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
TUBD1-215ENST00000593110 EIF4G2P78344 907 aaKnown RBP eCLIP12.73□□□□□ -0.37
TUBD1-215ENST00000593110 DLK2Q6UY11 383 aa12.73□□□□□ -0.37
TUBD1-215ENST00000593110 NYXQ9GZU5 481 aa12.73□□□□□ -0.37
TUBD1-215ENST00000593110 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
TUBD1-215ENST00000593110 ZNF408Q9H9D4 720 aa12.73□□□□□ -0.37
TUBD1-215ENST00000593110 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
TUBD1-215ENST00000593110 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 NTSR2O95665 410 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 HUNKP57058 714 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 CDC37L1Q7L3B6 337 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 ZNF516Q92618 1163 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 RPGRQ92834 1020 aaKnown RBP12.72□□□□□ -0.37
TUBD1-215ENST00000593110 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 VPS33BQ9H267 617 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 ZNRF3Q9ULT6 936 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 AKAP11Q9UKA4 1901 aa12.72□□□□□ -0.37
TUBD1-215ENST00000593110 MAP3K15Q6ZN16 1313 aa12.71□□□□□ -0.37
TUBD1-215ENST00000593110 ERVV-1B6SEH8 477 aa12.71□□□□□ -0.37
TUBD1-215ENST00000593110 MORN1Q5T089 497 aa12.71□□□□□ -0.37
TUBD1-215ENST00000593110 ABCC4O15439 1325 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 YDJCA8MPS7 323 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 HOXA2O43364 376 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 GTF2E1P29083 439 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-215ENST00000593110 KIAA2012Q0VF49 1180 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 SUSD4Q5VX71 490 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 MCM10Q7L590 875 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 CTU1Q7Z7A3 348 aaKnown RBP12.7□□□□□ -0.38
TUBD1-215ENST00000593110 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 ANKRD36CQ5JPF3 1778 aa12.7□□□□□ -0.38
TUBD1-215ENST00000593110 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
TUBD1-215ENST00000593110 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
TUBD1-215ENST00000593110 EGFRP00533 1210 aa12.69□□□□□ -0.38
TUBD1-215ENST00000593110 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
TUBD1-215ENST00000593110 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-215ENST00000593110 TTLL7Q6ZT98 887 aa12.69□□□□□ -0.38
TUBD1-215ENST00000593110 USP48Q86UV5 1035 aa12.69□□□□□ -0.38
TUBD1-215ENST00000593110 ZNF34Q8IZ26 560 aa12.69□□□□□ -0.38
TUBD1-215ENST00000593110 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
TUBD1-215ENST00000593110 RBM17Q96I25 401 aaKnown RBP12.69□□□□□ -0.38
TUBD1-215ENST00000593110 POLR2AP24928 1970 aaKnown RBP12.69□□□□□ -0.38
TUBD1-215ENST00000593110 TRPA1O75762 1119 aa12.68□□□□□ -0.38
TUBD1-215ENST00000593110 RAD17O75943 681 aa12.68□□□□□ -0.38
TUBD1-215ENST00000593110 GPTP24298 496 aa12.68□□□□□ -0.38
TUBD1-215ENST00000593110 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
TUBD1-215ENST00000593110 BRCA2P51587 3418 aa12.68□□□□□ -0.38
TUBD1-215ENST00000593110 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
TUBD1-215ENST00000593110 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
TUBD1-215ENST00000593110 CNOT7Q9UIV1 285 aaKnown RBP12.67□□□□□ -0.38
TUBD1-215ENST00000593110 SLC27A5Q9Y2P5 690 aa12.67□□□□□ -0.38
TUBD1-215ENST00000593110 TAF1P21675 1872 aa12.66□□□□□ -0.38
TUBD1-215ENST00000593110 ADM5C9JUS6 153 aa12.66□□□□□ -0.38
TUBD1-215ENST00000593110 TLL1O43897 1013 aa12.66□□□□□ -0.38
TUBD1-215ENST00000593110 DCTN1Q14203 1278 aa12.66□□□□□ -0.38
TUBD1-215ENST00000593110 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
TUBD1-215ENST00000593110 SUPT20HQ8NEM7 779 aa12.66□□□□□ -0.38
TUBD1-215ENST00000593110 TBC1D2Q9BYX2 928 aa12.66□□□□□ -0.38
TUBD1-215ENST00000593110 COL4A1P02462 1669 aa12.66□□□□□ -0.38
TUBD1-215ENST00000593110 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
TUBD1-215ENST00000593110 CENPFP49454 3210 aa12.65□□□□□ -0.38
TUBD1-215ENST00000593110 KRT26Q7Z3Y9 468 aa12.65□□□□□ -0.38
TUBD1-215ENST00000593110 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
TUBD1-215ENST00000593110 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
TUBD1-215ENST00000593110 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
TUBD1-215ENST00000593110 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
TUBD1-215ENST00000593110 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 SCN9AQ15858 1988 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 ZNF157P51786 506 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-215ENST00000593110 TNIP1Q15025 636 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 Q3C1V9 767 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 DPP8Q6V1X1 898 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-215ENST00000593110 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 DPF2Q92785 391 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 HLA-CQ95604 372 aa12.64□□□□□ -0.39
TUBD1-215ENST00000593110 DLG5Q8TDM6 1919 aa12.63□□□□□ -0.39
TUBD1-215ENST00000593110 FMNL1O95466 1100 aaPredicted RBP12.63□□□□□ -0.39
TUBD1-215ENST00000593110 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
TUBD1-215ENST00000593110 NGEFQ8N5V2 710 aa12.63□□□□□ -0.39
TUBD1-215ENST00000593110 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
TUBD1-215ENST00000593110 RTL9Q8NET4 1388 aa12.63□□□□□ -0.39
TUBD1-215ENST00000593110 H7C1D1 291 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 PSMD14O00487 310 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 GUCA2AQ02747 115 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
TUBD1-215ENST00000593110 HABP4Q5JVS0 413 aaKnown RBP12.62□□□□□ -0.39
TUBD1-215ENST00000593110 KIF6Q6ZMV9 814 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 MPNDQ8N594 471 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 C2orf69Q8N8R5 385 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 MIS18AQ9NYP9 233 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 SZT2Q5T011 3432 aa12.62□□□□□ -0.39
TUBD1-215ENST00000593110 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
TUBD1-215ENST00000593110 MOXD2PA6NHM9 499 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
TUBD1-215ENST00000593110 ADH1BP00325 375 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms