RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 UBE2Q1Q7Z7E8 422 aa13.95□□□□□ -0.18
RANBP3-230ENST00000593025 MTMR14Q8NCE2 650 aa13.95□□□□□ -0.18
RANBP3-230ENST00000593025 SLC17A8Q8NDX2 589 aa13.95□□□□□ -0.18
RANBP3-230ENST00000593025 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
RANBP3-230ENST00000593025 PPP2R3BQ9Y5P8 575 aa13.95□□□□□ -0.18
RANBP3-230ENST00000593025 CLRN2A0PK11 232 aa13.94□□□□□ -0.18
RANBP3-230ENST00000593025 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
RANBP3-230ENST00000593025 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
RANBP3-230ENST00000593025 GTF2IP78347 998 aa13.94□□□□□ -0.18
RANBP3-230ENST00000593025 SLC4A8Q2Y0W8 1093 aa13.94□□□□□ -0.18
RANBP3-230ENST00000593025 CDAN1Q8IWY9 1227 aa13.94□□□□□ -0.18
RANBP3-230ENST00000593025 ARAP2Q8WZ64 1704 aa13.94□□□□□ -0.18
RANBP3-230ENST00000593025 CWC25Q9NXE8 425 aaPredicted RBP13.94□□□□□ -0.18
RANBP3-230ENST00000593025 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
RANBP3-230ENST00000593025 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 SOX1O00570 391 aaPredicted RBP13.93□□□□□ -0.18
RANBP3-230ENST00000593025 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 DLGAP5Q15398 846 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 OTUD7BQ6GQQ9 843 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 FAM43AQ8N2R8 423 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 OPTNQ96CV9 577 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 PRMT6Q96LA8 375 aaPredicted RBP13.93□□□□□ -0.18
RANBP3-230ENST00000593025 CDC5LQ99459 802 aaKnown RBP13.93□□□□□ -0.18
RANBP3-230ENST00000593025 ELP3Q9H9T3 547 aa13.93□□□□□ -0.18
RANBP3-230ENST00000593025 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
RANBP3-230ENST00000593025 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
RANBP3-230ENST00000593025 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.92□□□□□ -0.18
RANBP3-230ENST00000593025 NBPF11Q86T75 865 aa13.92□□□□□ -0.18
RANBP3-230ENST00000593025 ANKRD13AQ8IZ07 590 aa13.92□□□□□ -0.18
RANBP3-230ENST00000593025 METTL22Q9BUU2 404 aaPredicted RBP13.92□□□□□ -0.18
RANBP3-230ENST00000593025 MBIPQ9NS73 344 aa13.92□□□□□ -0.18
RANBP3-230ENST00000593025 LEMD3Q9Y2U8 911 aa13.92□□□□□ -0.18
RANBP3-230ENST00000593025 SNAP23O00161 211 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 CTGFP29279 349 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 IREB2P48200 963 aaKnown RBP13.91□□□□□ -0.18
RANBP3-230ENST00000593025 RASA3Q14644 834 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 MTFR1Q15390 333 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 TAF1CQ15572 869 aaPredicted RBP13.91□□□□□ -0.18
RANBP3-230ENST00000593025 SUPT20HL1Q3ZLR7 823 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 CFAP100Q494V2 611 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 TEPSINQ96N21 525 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 CD209Q9NNX6 404 aa13.91□□□□□ -0.18
RANBP3-230ENST00000593025 CCL15-CCL14A0A0B4J2E2 113 aa13.89□□□□□ -0.19
RANBP3-230ENST00000593025 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
RANBP3-230ENST00000593025 LACTBP83111 547 aaPredicted RBP13.89□□□□□ -0.19
RANBP3-230ENST00000593025 CCL15Q16663 113 aa13.89□□□□□ -0.19
RANBP3-230ENST00000593025 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
RANBP3-230ENST00000593025 ALPK3Q96L96 1907 aa13.88□□□□□ -0.19
RANBP3-230ENST00000593025 F8W031 263 aaPredicted RBP13.88□□□□□ -0.19
RANBP3-230ENST00000593025 VGLL4Q14135 290 aa13.88□□□□□ -0.19
RANBP3-230ENST00000593025 DPF3Q92784 378 aa13.88□□□□□ -0.19
RANBP3-230ENST00000593025 LRCH3Q96II8 777 aa13.88□□□□□ -0.19
RANBP3-230ENST00000593025 ZFYVE28Q9HCC9 887 aa13.88□□□□□ -0.19
RANBP3-230ENST00000593025 SPTBN5Q9NRC6 3674 aaKnown RBP13.88□□□□□ -0.19
RANBP3-230ENST00000593025 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
RANBP3-230ENST00000593025 TLR2O60603 784 aa13.87□□□□□ -0.19
RANBP3-230ENST00000593025 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
RANBP3-230ENST00000593025 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.19
RANBP3-230ENST00000593025 JAG2Q9Y219 1238 aa13.87□□□□□ -0.19
RANBP3-230ENST00000593025 MAP3K2Q9Y2U5 619 aa13.87□□□□□ -0.19
RANBP3-230ENST00000593025 VCANP13611 3396 aa13.86□□□□□ -0.19
RANBP3-230ENST00000593025 IL1R1P14778 569 aa13.86□□□□□ -0.19
RANBP3-230ENST00000593025 GTF2A2P52657 109 aa13.86□□□□□ -0.19
RANBP3-230ENST00000593025 CASP7P55210 303 aa13.86□□□□□ -0.19
RANBP3-230ENST00000593025 CHRNDQ07001 517 aa13.86□□□□□ -0.19
RANBP3-230ENST00000593025 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
RANBP3-230ENST00000593025 C15orf52Q6ZUT6 534 aaKnown RBP13.86□□□□□ -0.19
RANBP3-230ENST00000593025 ANKRD2Q9GZV1 360 aa13.86□□□□□ -0.19
RANBP3-230ENST00000593025 BTBD19C9JJ37 291 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 H7C1W4 665 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 ELL2O00472 640 aaPredicted RBP13.85□□□□□ -0.19
RANBP3-230ENST00000593025 ITGA6P23229 1130 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 GJA8P48165 433 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
RANBP3-230ENST00000593025 FKBP1AP62942 108 aaKnown RBP13.85□□□□□ -0.19
RANBP3-230ENST00000593025 ARHGEF6Q15052 776 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 C8orf58Q8NAV2 365 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 ZNF70Q9UC06 446 aaPredicted RBP13.85□□□□□ -0.19
RANBP3-230ENST00000593025 SNCAIPQ9Y6H5 919 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 ADGRA2Q96PE1 1338 aa13.85□□□□□ -0.19
RANBP3-230ENST00000593025 SPDYE5A6NIY4 337 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 NEURL1BA8MQ27 555 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 MYO1BO43795 1136 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 TAF5LO75529 589 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 CSF1RP07333 972 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 IGHMBP2P38935 993 aaKnown RBP13.84□□□□□ -0.19
RANBP3-230ENST00000593025 UBE3BQ7Z3V4 1068 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 PLA2G12BQ9BX93 195 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 TMEM39BQ9GZU3 492 aa13.84□□□□□ -0.19
RANBP3-230ENST00000593025 A0A1W2PPC1 479 aa13.83□□□□□ -0.2
RANBP3-230ENST00000593025 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.2
RANBP3-230ENST00000593025 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
RANBP3-230ENST00000593025 GNRH1P01148 92 aa13.83□□□□□ -0.2
RANBP3-230ENST00000593025 GJB1P08034 283 aa13.83□□□□□ -0.2
RANBP3-230ENST00000593025 PRMT2P55345 433 aa13.83□□□□□ -0.2
RANBP3-230ENST00000593025 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
RANBP3-230ENST00000593025 C17orf99Q6UX52 265 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms